Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2374 ATGGGACGTGTAAGGACGAAGACAGTGAAGAAGTCATCGAGGCAAGTGATAGAGAGGTACTACTCTCGGATGACGCTCGACTTCCACACCAACAAGAAGGTTCTCGAAGAGGTCGCGCTCATCCCCTCAAAGAGGCTTCGTAACAAAATCGCCGGCTTCTCCACCCACCTCATGAAGCGCATTCAGAAGGGTGCTGTTCGCGGAATCTCCCTCAAGCTGCAGGAGGAGGAGCGCGAGCGCCGCATGGACTTCGTCCCCGAGATCTCGGCCATCCGGACCGACCAGATCGAGGTCGACGGTGAGACCCTCGACATGCTCGCCGCCCTCGGAATGTCTGAAATCCCCGGCGTCGTCAAGGTCGATCCTGTCCCTGTACAGGCGCCGCTTGCCTTCGGCCGTGGCGCCGGTGGAAGGAGGTTTTAA 423 0.5887 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVALIPSKRLRNKIAGFSTHLMKRIQKGAVRGISLKLQEEERERRMDFVPEISAIRTDQIEVDGETLDMLAALGMSEIPGVVKVDPVPVQAPLAFGRGAGGRRF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2374 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 - -
Pvu7g2374 140 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Pvu7g2374 140 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Pvu7g2374 140 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Pvu7g2374 140 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Pvu7g2374 140 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Pvu7g2374 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2374 Pvu-Chr7 47092984 47093685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2374 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 79.433 2.21e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2374 K02962 - gmx:100785402 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2374 7 47092984 47093685 Pvu7g2374 7 47092984 47093685 ECH