Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2367 ATGAAGGTGGTTGCTGCGTATTTACTTGCCGTCCTCGGAGGCAACCAGAGCCCGTCCGCCGCTGTCATCAAGGATATTCTCGGCTCCGTTGGTGCAGAAGCAGATGATGATAGGATAGAACTCTTTTTGTCTGAAGTTAAGGGGAAGGATATTGTTGAGGTTATTGCTGCTGGTAGGGAAAAGCTTGCCTCAGTGCCCTCAGGTGGTGGTGGTGGTGTTGCTGTTGCTGCTGCGTCTGGGGGAGGTGGCGCTGCTGCCGCTCCTGCCGCTGAGGCAAAGAAAGAGGAGAAAGTCGAGGAGAAAGAGGAATCCGATGATGATATGGGTTTCAGTCTCTTTGATTAA 345 0.5217 MKVVAAYLLAVLGGNQSPSAAVIKDILGSVGAEADDDRIELFLSEVKGKDIVEVIAAGREKLASVPSGGGGGVAVAAASGGGGAAAAPAAEAKKEEKVEEKEESDDDMGFSLFD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2367 114 MobiDBLite consensus disorder prediction 86 114 - -
Pvu7g2367 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pvu7g2367 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pvu7g2367 114 Gene3D - 1 59 IPR038716 -
Pvu7g2367 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pvu7g2367 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
Pvu7g2367 114 Pfam 60s Acidic ribosomal protein 17 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2367 Pvu-Chr7 47026817 47028588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2367 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.667 3.86e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2367 K02943 - gmx:100499761 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2367 7 47026817 47028588 Pvu7g2367 7 47026817 47028588 ECH