Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2354 ATGGCGGAAGAACACCGATGCGAGACTCCGGAAGGTCACCGTCTCTGCGTCAACAACTGCGGCTTCTTCGGTAGCTCCGCCACCATGAACCTCTGCTCCAAATGCTACGGCGCGATCCGTTTGAAGGAGCAGGACGACGCGACAACCAAATCCACGATCGAGGCCGCGCTCTCTTCCTCCGCTAAGACGCCGCTTTCCACGTCGCCTCCGGCGGCGGCGGTCGATGTCCTTGTCAAAGCATCGCCTCCGCTTCCGGCAGAAGTTACGGTCGCGGTTCCGGTTCAGGTCCCGGTGACGTCTAGTTCTATAACAGGTTCGGCGCAACCGAACCGGTGCGCCGCGTGTCGGAAGCGCGTGGGGTTGACTGGGTTCAAGTGCAGGTGCGGAGTCACGTTCTGTGGGGCTCACAGGTATCCGGAGAAGCACGCGTGCGGGTTCGACTTTAAGACGGTGGGGCGAGAGGAGATTGCTCGGGCTAACCCCGTGATCAAAGCAGAGAAGCTGCGGAGGATATGA 516 0.6085 MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSKCYGAIRLKEQDDATTKSTIEAALSSSAKTPLSTSPPAAAVDVLVKASPPLPAEVTVAVPVQVPVTSSSITGSAQPNRCAACRKRVGLTGFKCRCGVTFCGAHRYPEKHACGFDFKTVGREEIARANPVIKAEKLRRI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2354 171 Gene3D - 91 167 IPR035896 -
Pvu7g2354 171 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Pvu7g2354 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 171 - -
Pvu7g2354 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Pvu7g2354 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Pvu7g2354 171 SUPERFAMILY AN1-like Zinc finger 105 166 IPR035896 -
Pvu7g2354 171 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Pvu7g2354 171 Gene3D - 1 67 - -
Pvu7g2354 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Pvu7g2354 171 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 1 171 - -
Pvu7g2354 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Pvu7g2354 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2354 Pvu-Chr7 46883091 46884642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2354 1 171 C2H2 Transcription Factor Family AT3G52800 54.070 1.79e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2354 - - gmx:100813749 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1956 1 45531180 45532573 Pvu7g2354 7 46883091 46884642 PCT