Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2336 ATGGAGGCCATTGGTTCTGTGGATGACCTCTTGGATTTTTCGTTGGACATAGGTGAGGAAGATGATGACGAAGACAAACCTAGGAAACCTTGTCCTTCACTTAACTCAAAATGTGGCAACCCATCATTGTTTAATCCATTGGTACCAGATGATCCGAACCATTCATATTCTGAGTTTGTGGAAGAAGAGCTTGAATGGCTATCCAATAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACCTATCATGTATTCAACCTGACACAGCCAAGATGCGCAAAACAACCCCAGCAACAACCCCAATGCTTGAGTACAGCTCAGGCAGTAGCAACAGTAATAACAGCAGTAACAGTATTTCCCTCCTAAACAGTTGTGATCACCTTAAGGTCCCAGTCCGTGCACGGAGCAAGAGACGCAGTAGGTGTCGCCCTGGTATTGCTGATGAAAACTCTGGTCAGCAATTCTGGTGGAGACAACCAAGTAATGAAACTTCCAAGGCAGAAGAAGGGATGAAAATCTCGCCAATTGGGAGGAAATGTCAGCACTGTGGGGCTGAAAAAACTCCACAGTGGCGGGCAGGTCCCCTTGGGCCTAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGTCGGCTTGTGCCTGAATACCGTCCTGCTAGTAGCCCAAGTTTTCGTAGTGATTTGCATTCTAATTCCCACAGGAAGATAACAGAGATGAGGAGGCAGAAGCAAACGGGAATGGGATAA 753 0.4568 MEAIGSVDDLLDFSLDIGEEDDDEDKPRKPCPSLNSKCGNPSLFNPLVPDDPNHSYSEFVEEELEWLSNKDAFPSVETFVDLSCIQPDTAKMRKTTPATTPMLEYSSGSSNSNNSSNSISLLNSCDHLKVPVRARSKRRSRCRPGIADENSGQQFWWRQPSNETSKAEEGMKISPIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPSFRSDLHSNSHRKITEMRRQKQTGMG* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2336 250 MobiDBLite consensus disorder prediction 1 46 - -
Pvu7g2336 250 CDD ZnF_GATA 179 227 IPR000679 GO:0006355|GO:0043565
Pvu7g2336 250 Gene3D - 174 227 IPR013088 GO:0006355|GO:0008270
Pvu7g2336 250 Pfam GATA zinc finger 180 213 IPR000679 GO:0006355|GO:0043565
Pvu7g2336 250 SMART GATA_3 174 224 IPR000679 GO:0006355|GO:0043565
Pvu7g2336 250 MobiDBLite consensus disorder prediction 217 250 - -
Pvu7g2336 250 ProSiteProfiles GATA-type zinc finger domain profile. 174 210 IPR000679 GO:0006355|GO:0043565
Pvu7g2336 250 PANTHER GATA TRANSCRIPTION FACTOR 1 7 246 - -
Pvu7g2336 250 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 176 237 - -
Pvu7g2336 250 ProSitePatterns GATA-type zinc finger domain. 180 205 IPR000679 GO:0006355|GO:0043565
Pvu7g2336 250 MobiDBLite consensus disorder prediction 94 117 - -
Pvu7g2336 250 PANTHER GATA TRANSCRIPTION FACTOR 7 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2336 Pvu-Chr7 46703048 46706494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2336 61 250 C2C2-Gata Transcription Factor Family AT3G24050 44.811 1.69e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pvu7g2336 GATA 8.8e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2336 - - gmx:100784527 387.882