Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2330 ATGGATTCCGCCCCCAATCTTTCCCCTCATTCTCACAACCATACCTCCACTCCACCGCACTCCCGTGTCAAGGGTTTTCTCGTCTACACTCGCCGCAAGCACTACCTCAATTCCGCCAATCATGAACCCAAAACAGAACATTTTCAAACCGAACAATCTCGCGCCTGCTGCCAGGACCCCCTTTTCAACCTCTCCAAGCTCAACTCTCCCGATCCTCCCCAGGAACTAATCAAGACGGAATTGAATTCGCCGCCGCAGAAGAAGATTGTGGCGGTCCACAAGAAACCCGTTACCGTCAAGGAGCTCTTTGAAACTGGTTTGCTCGAAGGCGTTCCGGTCGTTTACGTTGGTTGCAAGAAGGATTCAACTTCGGAATTGCGGGGTGTAATTACAGATGGGGGGATCTTGTGCTCATGCCGTCTGTGCAATGGATGCAGGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGTAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTGCTTGAACTATTGAGAGCATGCAGGGCAGCTCCGCTACATACTTTGGAGACGACCGTTCAAAATTTTGTCAGTTCTCCACCTGAGGAAAAATATTTTACTTGCAAAAGTTGCAGAGGATGTTTCCCTGCTTCCAATGTGGAAAGAGTGGGCCTTTTGTGTCTATCATGCGTGGAATCAAGGAAATCTGAAAGCAGTTCGATTCATGCTGTTGGCAAAAGAGTCAGGTCCCCTCGGCCAGTATTATTCTCCCGTTCATGTTCTTGTTGTACTTCCGAACTGTGTATTTCTCCTCAAACTAAGAGACACTGGAAGACAAGAACAAAATCATCAAAGCTGTCATTAAAATTGAAGACTGCTCCAATTACTTCAAAGTGTTTATCTCCACAACATAAAAGTCAGTGGAGGATCTCTAAAAGGTATCAACGGATACATAAATTGATTTTTGAAGAGGATGGATTGCCTAATGGAGCAGAAGTAGCTTATTATGCGCGGGGACAGAAACTGCTTGAGGGTATCAAAACACCCACTGGAATTGTCTGTCGATGCTGTAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACATCGAATGGGGTGTCACTCCATGAGTTAGCAATATTTCTCTCAAAAGATCACAAATGCACTACAAAGCAGAATGATTATGCATGTGTTGTTTGTTGGGATGGTGGAAACCTGTTGCTCTGTGATGGATGTCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCCCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACAATTCTCAGAGAAAGGCCTGTGTTATACAATGCCGATGCCGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCTATTGAGGAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACATAGGAGCTGAGATTGGTGGATGTATTTTATGCAGGAGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGCACAATTATAATCTGTGATCAGTGTGAAAAGGAATATCATGTTGGTTGCTTGAGGGATCATAAGATGGCATTTCTGAAGGAGTTGCCAGAAGGGGATTGGCTTTGTTGCAATGATTGCACCAGAATACATACTACTTTGGAGAATCTCCTGGTTACGGTGGCTGAAAGACTTCCTGAATCTCTTTTGGATGTTATAAAGAAGAAGCATGTGGAAAGATGTTTAGAACCCCTTAATGAGATTGATGTAAGATGGAAACTTCTTAATGGAAAAATTGCGTCTCCTGAAACTAGGCCATTACTTTTGGAGGCAGTGGCCATGTTTAATGAATGCTTTGATCCTATAGTTGATCCAGCTGCTGGACGTGACCTCATTCCTGCCATGGTTTATGGAAGGAATTTGCAGACTCAGGATTTTGGAGGAATGTATTGTGCATTATTGATTGTCAATTCATCTGTGGTATCCGCTGGCATGCTTCGAATTTTTGGTGAGGACATTGCCGAACTCCCCATAGTTGCAACAAGATATAAGAACCGTGGGAAGGGCTACTTCCAAACCCTTTTCTCGTGCATTGAAAGGCTGCTGGCTTTCTTGAAAGTGAAAAATCTTGTGCTACCGGCTGCTGAAGAAGCAGAATCTATATGGACAGAAAAATTCGGATTTAGCAAGATGAAACCCGACGAGCTTACCAACTATAGAATGAATTGTCATCAGATCATGGCATTTAAGGGGACAATAATGCTTCATAAAACGGTGCCTCGTTGTAGGGTCATCAATACTCAATCATCAGAAATCTATATTCAAGATAGCCAATCGTGA 2370 0.4401 MDSAPNLSPHSHNHTSTPPHSRVKGFLVYTRRKHYLNSANHEPKTEHFQTEQSRACCQDPLFNLSKLNSPDPPQELIKTELNSPPQKKIVAVHKKPVTVKELFETGLLEGVPVVYVGCKKDSTSELRGVITDGGILCSCRLCNGCRVIPPSQFEIHACNIYKRAAQYICLENGKSLLELLRACRAAPLHTLETTVQNFVSSPPEEKYFTCKSCRGCFPASNVERVGLLCLSCVESRKSESSSIHAVGKRVRSPRPVLFSRSCSCCTSELCISPQTKRHWKTRTKSSKLSLKLKTAPITSKCLSPQHKSQWRISKRYQRIHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTPTGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYACVVCWDGGNLLLCDGCPRAFHKECASVSSIPRGEWYCQICQHTILRERPVLYNADAVAAGRVEGVDPIEEIAKRCIRIVKDIGAEIGGCILCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAFLKELPEGDWLCCNDCTRIHTTLENLLVTVAERLPESLLDVIKKKHVERCLEPLNEIDVRWKLLNGKIASPETRPLLLEAVAMFNECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALLIVNSSVVSAGMLRIFGEDIAELPIVATRYKNRGKGYFQTLFSCIERLLAFLKVKNLVLPAAEEAESIWTEKFGFSKMKPDELTNYRMNCHQIMAFKGTIMLHKTVPRCRVINTQSSEIYIQDSQS* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2330 789 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 44 775 - -
Pvu7g2330 789 MobiDBLite consensus disorder prediction 1 20 - -
Pvu7g2330 789 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 657 743 IPR016181 -
Pvu7g2330 789 SMART PHD_3 501 558 IPR001965 -
Pvu7g2330 789 SMART PHD_3 413 454 IPR001965 -
Pvu7g2330 789 ProSitePatterns Zinc finger PHD-type signature. 414 453 IPR019786 -
Pvu7g2330 789 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 399 476 IPR013083 -
Pvu7g2330 789 MobiDBLite consensus disorder prediction 1 23 - -
Pvu7g2330 789 Pfam Tify domain binding domain 350 397 IPR032308 -
Pvu7g2330 789 Pfam Tify domain binding domain 128 183 IPR032308 -
Pvu7g2330 789 PANTHER AUTOIMMUNE REGULATOR 44 775 - -
Pvu7g2330 789 ProSiteProfiles Zinc finger PHD-type profile. 411 456 IPR019787 -
Pvu7g2330 789 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 500 560 IPR013083 -
Pvu7g2330 789 SUPERFAMILY FYVE/PHD zinc finger 399 456 IPR011011 -
Pvu7g2330 789 SUPERFAMILY FYVE/PHD zinc finger 497 556 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2330 Pvu-Chr7 46633601 46645072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2330 63 776 PHD Transcription Factor Family AT2G36720 48.674 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2330 - - gmx:100798276 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2330 7 46633601 46645072 Pvu7g2330 7 46633601 46645072 ECH
Pvu1g1898 1 44786992 44789355 Pvu7g2330 7 46633601 46645072 PCT