Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2324 ATGCAGGACACAATGTTGGTGCCGCCATGGTTTGAGCCACTCCTGACCACATCCTTTTTCAATGTGTGTCGCGTCCACGGAGACGCCGCCAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAACGAGGATGCGTTTTGCTTTTATTGCCGATCCTCGCGGCACAAAGATCACCGAGTGATTCAGATAAGGCGATCTTCGTATCACGATGTTGTGAGGGTGTCGGAAATTCAGAAAGTGTTGGACATTAGTGGAGTGCAAACCTATGTGATCAACAGTGCGAGAGTTTTGTTTCTGAACGAGAGGCCTCAACCCAAGTCAGGAAAAGGTGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTCTGTTCTTTGGGGTGTAAGCTTGTGGGAATAAAGAGAAAGGGGGATTCTAAAAAGGAGACATCAACAATGGAGGGCATTGGCATGTCAAGGAGAATGGTTTGTTCAAGACATGAGCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACGCAAGGCGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGCCTCCTAA 618 0.4741 MQDTMLVPPWFEPLLTTSFFNVCRVHGDAARSECNMFCLDCNEDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRKGDSKKETSTMEGIGMSRRMVCSRHEQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFAS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2324 205 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 204 - -
Pvu7g2324 205 MobiDBLite consensus disorder prediction 159 205 - -
Pvu7g2324 205 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 204 - -
Pvu7g2324 205 SUPERFAMILY B-box zinc-binding domain 21 65 - -
Pvu7g2324 205 MobiDBLite consensus disorder prediction 159 175 - -
Pvu7g2324 205 Pfam PLATZ transcription factor 64 135 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2324 Pvu-Chr7 46579686 46581759 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu7g2324 PLATZ 9.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2324 - - gmx:100809455 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1900 1 44835231 44836774 Pvu7g2324 7 46579686 46581759 PCT