Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2312 ATGGGGGACAAACACCATCTAGACGACAGCAGCGATTTCACCTCCGAGGACGAAGGCACCGAGGATTACCGCCGCGGTGGCTACCACGCTATCCGAATCGGCGACACCTTCAACGCCGGTAGCTACGTCGTTCAGTCTAAGCTCGGTTGGGGCCATTTCTCCACTGTCTGGCTCGCTTGGGACATCAAACATTCTAGATATGTGGCTTTGAAGGTTCAGAAGAGTGCTCAGCACTACACCGAGGCGGCCATGGATGAGATAACGATTTTGCAACAGACTGCGGAGGGAGATCCTGACGATAAGAAATGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCCAATGGGCAGCATGTCTGCATGGTTTTTGAGTACCTTGGGGACAATCTTTTGACACTTATTAAGTACTCGGATTACCGCGGGTTGCCTATCGCCATGGTTAAGGAGATTTGCTTTCACATTCTGGTTGGATTGGATTACTTGCACAAACAGCTTTCCATCATACATACTGACTTGAAGCCTGAAAACATCCTGCTTTTGTCGATGATTGATCCATCTAAGGATCCTAGAAAGTCTGGGGCGCAGCTTATTCTTCCCAATAGTAAAGATAAGATGGTACTGGAGTCGACAGGTGCGAAAGATACGAAGATGTTGAATGGGGATTTGGTTAATCACAAGAAGAAGATTAAGAGAAAAGCTAAACAAGCAGCTCATGGTTGTTTTGAGAAGGAAGCTTCTGAAGGAGTTGAGGGTAATCCTGAAACTTCTGGGGCTGTGGAGTGGTCTCCTAACACGAGTTCTGCAAGAGAACAGGCTTCCAGTTCTGCTGGAACTAGTAGGTTATCGGATGCTGATGCAGCAAAGTTGAAAGAGCAGGGTAACAAAAGAGGAAGCCGATCAATGAGACAGAAGCTGCTGGCATCAGTTGATCTCAAGTGCAAGTTAGTGGACTTTGGTAATGCCTGCTGGACATATAAACAGTTTACTAATGATATCCAGACAAGACAGTATCGGTGCCCAGAGGTGATCCTTGGGTCAAAATATTCCACATCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTGTTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGGGGGCGTTATTCCCGTGATTTCTTTAATAGATATGGTGATTTAAGGCATATCCGGCGATTGCGATTCTGGCCCTTGAATAAAGTCCTCATGGAGAAGTATGATTTCAGTGAGAAAGATGCAAATGATTTGACGGACTTTTTGGTTCCTATCCTTGATTTTGTTCCTGAAAAGCGGCCTACAGCTGGTCAGTGCCTTCTGCATCCCTGGATCAATGTAGGTCCACGTCTTTTGGAGCCATCTGTGCCTTCTAATCACAACCCAGCTTCTGAAACTGCTGTTTTGGATCAGAAGAAAAGGGAAAAAGATGAGAGGGAGGCCATGGAGGCAGGAATGGGAAATATTGTTATCAATTCAGATTCTAAATCACTGATGCAATCACCATCAAAGAAAGCCTTCAAAGCCACCCAGCAGTAG 1629 0.4567 MGDKHHLDDSSDFTSEDEGTEDYRRGGYHAIRIGDTFNAGSYVVQSKLGWGHFSTVWLAWDIKHSRYVALKVQKSAQHYTEAAMDEITILQQTAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPIAMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAQLILPNSKDKMVLESTGAKDTKMLNGDLVNHKKKIKRKAKQAAHGCFEKEASEGVEGNPETSGAVEWSPNTSSAREQASSSAGTSRLSDADAAKLKEQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDANDLTDFLVPILDFVPEKRPTAGQCLLHPWINVGPRLLEPSVPSNHNPASETAVLDQKKREKDEREAMEAGMGNIVINSDSKSLMQSPSKKAFKATQQ* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2312 542 SMART serkin_6 42 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2312 542 ProSiteProfiles Protein kinase domain profile. 42 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2312 542 CDD STKc_SRPK 31 475 - -
Pvu7g2312 542 MobiDBLite consensus disorder prediction 497 513 - -
Pvu7g2312 542 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 539 - -
Pvu7g2312 542 MobiDBLite consensus disorder prediction 242 303 - -
Pvu7g2312 542 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Pvu7g2312 542 MobiDBLite consensus disorder prediction 286 300 - -
Pvu7g2312 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pvu7g2312 542 PANTHER SERINE KINASE-LIKE PROTEIN 9 539 - -
Pvu7g2312 542 Pfam Protein kinase domain 42 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2312 542 Pfam Protein kinase domain 308 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2312 542 MobiDBLite consensus disorder prediction 520 542 - -
Pvu7g2312 542 MobiDBLite consensus disorder prediction 485 542 - -
Pvu7g2312 542 Gene3D Phosphorylase Kinase; domain 1 18 124 - -
Pvu7g2312 542 MobiDBLite consensus disorder prediction 1 21 - -
Pvu7g2312 542 SUPERFAMILY Protein kinase-like (PK-like) 37 488 IPR011009 -
Pvu7g2312 542 MobiDBLite consensus disorder prediction 259 283 - -
Pvu7g2312 542 Gene3D Transferase(Phosphotransferase) domain 1 125 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2312 Pvu-Chr7 46480232 46489492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2312 7 526 EF-hand Containing Proteins AT5G22840 69.275 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pvu7g2312 Pkinase 1.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2312 K08832 - gmx:100810777 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2312 7 46480232 46489492 Pvu7g2312 7 46480232 46489492 ECH