Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2311 ATGGTTCTCAAGACCGAACTTTGCCGTTTCAGTGGTGCAAAGATCTACCCTGGGAAAGGCATACGATTTGTTCGTGGTGATTCTCAGGTCTTCCTCTTCGCCAACTCCAAATGCAAGAGGTATTTCCACAACCGATTGAAGCCATCAAAGCTCACCTGGACAGCCATGTACAGGAAACAGCATAAGAAGGATATTGCCCAAGAAGCTGTGAAGAAGAGGCGTAGGGCCACCAAGAAACCTTACTCTAGGTCCATTGTTGGTGCTACACTGGAAGTTATTCAGAAGAAAAGAGCAGAGAAGCCAGAAGTTCGTGATGCTGCTAGAGAAGCTGCTCTGCGTGAAATCAAGGAGAGGGTAAAGAAAACAAAAGATGAGAAGAAGGCAAAGAAGGCTGAAGTTCAGGCCAAGTTACAAAAATCACAAGGCAAAGGTGCTGTCAGCAAGGGTGCTGCACCCAAAGGACCCAAGCTTGGTGGTGGTGGTGGCAAGCGCTAA 495 0.4768 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERVKKTKDEKKAKKAEVQAKLQKSQGKGAVSKGAAPKGPKLGGGGGKR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2311 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Pvu7g2311 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Pvu7g2311 164 Coils Coil 112 143 - -
Pvu7g2311 164 MobiDBLite consensus disorder prediction 119 164 - -
Pvu7g2311 164 SMART 4TRASH 8 46 IPR011017 -
Pvu7g2311 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Pvu7g2311 164 Gene3D - 69 138 - -
Pvu7g2311 164 MobiDBLite consensus disorder prediction 119 136 - -
Pvu7g2311 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 - -
Pvu7g2311 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Pvu7g2311 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Pvu7g2311 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2311 Pvu-Chr7 46477408 46479311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2311 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 2.36e-87 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2311 K02896 - gmx:100499884 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2311 7 46477408 46479311 Pvu7g2311 7 46477408 46479311 ECH
Pvu1g1913 1 44970738 44972800 Pvu7g2311 7 46477408 46479311 PCT