Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2308 ATGCTCTTTCCTCTCTTCAACTATTCGATTAAGGGCGCTGGAATGTTCTCTGGGATGGTAGGAGTGGATAACTCTCTGCAACCGCAGCAACAACAAAACCCTCACCACTTGCAACACCACCCCCAAATGGTTCCCTATGCTCCACACCATGACACTGATCCACATCATCCACACCATAATCAATCCATCAAACAAGGGTACCCTCCCTATTCTTCGGCCAAGACCAAACAACAGCAGCATAGTGGCCTCAGTGATGAGGATGATGACACCTCGGACCCCAAGAAGAAGGTCTCGCTGTGGCAGAGAATGAAGTGGACTGACACCATGGTGAGGCTTTTGATAATGGCGGTTTATTACATTGGTGATGAGGGTGGCTCGGAAGGGACTGATAAGAAGAAGTCCTTGGGTATGTTGCAGAAGAAAGGGAAGTGGAAGTCGGTGTCCAGGGCTATGATGGAGAAAGGGTCCTATGTTTCTCCTCAACAGTGTGAGGACAAGTTCAATGACTTGAACAAGAGGTATAAGAGGGTGAATGATATTCTTGGCAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAATTTGTTGGAAACGATGGAGTTGTCACCAAAGATGAAAGAGGAGGTAAAGAAGTTGCTCAATTCCAAACATTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGTCATGTGAATAACAATCCTCCACAGCAAGGAGAGACTGGGGGTGACGTGCCTCAGTCTCAGGCTCAACTACATCAGCAGCAGCCTCAGCAACAACAGCCTCAGCAACAACAGCAACAGCAACCTTGTTTTCATTCATCAGAGGTGGAGAATTTGGGGGCTTCAGGGGTGGAGGGTTTGAGGATGTTGAAAGTGGGAAATGGGGAAGAGAATGATGATGATTCTGATGAGGAGGAAGACTCTGAGGATGATTCGGATGAGGAGGAAGATGATTCAGGAGAAGGTGGTTCAAGGGGTAATGTGGGGCATGGACATGAAAATATGGAGGATGATAATGATGGAAGGTCAATGAGGAAGAGGGCAAGGAAAGTGAGGGAAGTTCCTGTGTCACCACTGATGATGCAGCAACTGAGTGCTGAGGTGAGTGGTGTGTTCCAAGATGGGGGTAGGAGTGCTTGGGACAAGAAGCAATGGATGAGGAGCAGGATACTGCAGTTGGAGGAGCAGCAAATAAGCTATCAGAGTCAATCATTTGAGTTGGAGAAGCAAAGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGAAGAGAGCCAAACTTGAAAATGAACGAAGGAGGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGCCAGAAGGAGTTTGAACTGATGAGTCTTCAACACCAACAAAAGCATCAACAACAGCAACATTCTTCCACTTAG 1422 0.4691 MLFPLFNYSIKGAGMFSGMVGVDNSLQPQQQQNPHHLQHHPQMVPYAPHHDTDPHHPHHNQSIKQGYPPYSSAKTKQQQHSGLSDEDDDTSDPKKKVSLWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDKKKSLGMLQKKGKWKSVSRAMMEKGSYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLETMELSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHVNNNPPQQGETGGDVPQSQAQLHQQQPQQQQPQQQQQQQPCFHSSEVENLGASGVEGLRMLKVGNGEENDDDSDEEEDSEDDSDEEEDDSGEGGSRGNVGHGHENMEDDNDGRSMRKRARKVREVPVSPLMMQQLSAEVSGVFQDGGRSAWDKKQWMRSRILQLEEQQISYQSQSFELEKQRLKWARFSSKKEREMKRAKLENERRRLENERMVLLIRQKEFELMSLQHQQKHQQQQHSST* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2308 473 MobiDBLite consensus disorder prediction 80 96 - -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 300 323 - -
Pvu7g2308 473 PANTHER F16F4.11 PROTEIN-RELATED 16 473 - -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 24 38 - -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 333 356 - -
Pvu7g2308 473 Pfam Myb/SANT-like DNA-binding domain 102 225 IPR044822 -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 64 79 - -
Pvu7g2308 473 Gene3D - 105 176 - -
Pvu7g2308 473 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 16 473 - -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 24 96 - -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 296 356 - -
Pvu7g2308 473 MobiDBLite consensus disorder prediction 234 276 - -
Pvu7g2308 473 Coils Coil 423 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2308 Pvu-Chr7 46446750 46448842 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g2308 Myb_DNA-bind_4 4.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2308 - - gmx:100816661 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2308 7 46446750 46448842 Pvu7g2308 7 46446750 46448842 ECH
Pvu1g1917 1 45016840 45018779 Pvu7g2308 7 46446750 46448842 PCT