Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2306 ATGGCCTCTTGCGACGACGACGACGACTTCTCTCTCCTCCGTGACGATAACCACCACCTCCACCAACCTTACGCGCCGCACCACCACTTCTCCCCCTCCGCCGTCGCCGTCGCTCCTGTCCCACCCAAATCCGTCGCCGACGACGCCGAGGACTACGGAAACCCCTTCGACGACGATGGCGGCAGTGAGAAGCGCAAGGACCGCGAGGAGATCGGCGAGGGAGCTGCGTCGTACGGATTCAACAAGAGATCTAAGGCTCCGCCGTCGAGCACAGGCAGCGCCGAGTACCGGAAGGACAGGGAGGAGTGGAGCGACACAGCGATCGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACACAGCTGAATCGGGGAAACCTGAGAGGAAGAGATTGGGAGGAGGTTGCGTTGGTGGTGAGCGGACGGTGCGAGAACCAATCGAAGAGCGTGGAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATGAGCAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGTTCAAACAATTGGAGCAGATTGTCGGGAATTCTCTTCCGGCGAAATTTCCCGATGAGGATAAAGCGGTTGTTTCTGCCGGAACTTCGCCCAGACAATCGAAGAGATATGGAGTGGCAACACCCAGTACTGGTGGTCAAGCGAATAGCATGAGGTCAAAAGCACTGACAAACCTTAGATGGCGGAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAACATTGACCCTAAGGTGGCTATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTTGAGGTGGCTATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGGGTAACTGCGACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACAGTGATGAATTCAATATTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAATTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCGATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATCAGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCGGTCCTCAAGGGTACTAATGTAGATGGTGTGTATGACTGCAACTCACGAGATAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGGTCAAGAGGAGTCACCTCTATGGATGCGTCAGCGCTGACATTCTGCAAGGGAAATGCCATTCCTGTCGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCTAAAGCTTTATGTGGAGAACAAGTTGGCACACTAATTGATGAAACTGGAGCAGTAAGCTAA 1449 0.5079 MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSPSAVAVAPVPPKSVADDAEDYGNPFDDDGGSEKRKDREEIGEGAASYGFNKRSKAPPSSTGSAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVALVVSGRCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFPDEDKAVVSAGTSPRQSKRYGVATPSTGGQANSMRSKALTNLRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNAIPVVVFNLLEPGNISKALCGEQVGTLIDETGAVS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2306 482 Gene3D - 103 166 - -
Pvu7g2306 482 SUPERFAMILY Carbamate kinase-like 242 475 IPR036393 -
Pvu7g2306 482 Gene3D - 234 481 IPR036393 -
Pvu7g2306 482 PANTHER URIDYLATE KINASE 59 481 - -
Pvu7g2306 482 MobiDBLite consensus disorder prediction 209 234 - -
Pvu7g2306 482 Coils Coil 143 170 - -
Pvu7g2306 482 Pfam Myb/SANT-like DNA-binding domain 100 190 IPR044822 -
Pvu7g2306 482 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 59 481 IPR011817 GO:0006221|GO:0009041
Pvu7g2306 482 Hamap Uridylate kinase [pyrH]. 241 476 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pvu7g2306 482 MobiDBLite consensus disorder prediction 208 234 - -
Pvu7g2306 482 MobiDBLite consensus disorder prediction 19 98 - -
Pvu7g2306 482 MobiDBLite consensus disorder prediction 57 73 - -
Pvu7g2306 482 CDD AAK_UMPK-PyrH-Ec 244 476 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pvu7g2306 482 Pfam Amino acid kinase family 245 455 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2306 Pvu-Chr7 46426949 46431628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2306 76 200 Trihelix Transcription Factor Family AT3G14180 37.500 1.10e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g2306 AA_kinase 2.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2306 - - gmx:100805459 845.114