Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2301 ATGGAAGCAGCACTCAACAACAACTCCATTTCTGCAGGGTCAGCTCCACCACCATCGGGGACACCATCAGTGGGGTCTCAGCCAATGAACATGAATGTTAACATGAACATGAACGTGGGAAGCACCGAAGGAACAACAGCACAGACACCAGCACCAGCACCAACGCCAACAGCGATGGTTCCTGCAGTGCCAGCTGCAACGACAACAACAACATTGGTAACAACAACACCAGGGAGCACTGGGGGGCAAGGGAGTTTTGACTTGTTTGGGAAGAAGAAGAGAGGGAGGCCGAGAAAGTATGATGCAGACGGGAACCTGAGGGTGAGTGCAACCCCAACACCACCTCCACCAGGTTTCACTTTGTCCACACCTTCTGAGTTCTCTAACAAAAGGGGCCGTGGCAAACACACAGCTTTTGGCAACTACCAACTCTTTTCTTCTTTTGGTGAGGTGTTTGCAAACACAGCTGCTGGTGATTTCATACCGCATGTGGTGACTGTTTATACTGGAGAGGATGTTGCTGGAAAGATCTTGTCATTTGCTCAGAAGGGTCCAAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCAAATGTCACCATACGCCAACCCGGTTCTTCTGGTGGCATATTAACTTACGAGGGTCGATTTGAGATTTTATCTTTGTCTGGATCGTTCACTGTCGCTGACAACAGTGGCATGAAAAGTCGAACTGGTGGATTGAGTGTCTCACTTGCTGGCCCTGATGGTCGAGTGATAGGAGGTGGTGTTGCTGGACTTTTAACAGCTGCTGGTCCCATCCAAATTGTAGTAGGAAGCTTCACGCAAAATGCGCACAAAAGCCAAAAGAAGAAGTATCAACGTGAACAACAGACAGTGGTCTCCCCTACTTCAGCTGTTCAAGAAACTGTGACATTTGCTAGACCTATCTCACAAGCAAATGCTGATGGTGAAAACTTTTTGATGACCATGTCTCAGATACCAGATCAAACCCAGAGAGAATCTGTGAGTGTTTCAAGTGACAAACAGAACCTAGATGCTACACTTGATGCTGCTACTTGGAATGGTTCTGAGGAATATTCAGACCAGAGGACATCCCCGGACATCAACATATCTTTGCCAGATGAATAG 1134 0.4753 MEAALNNNSISAGSAPPPSGTPSVGSQPMNMNVNMNMNVGSTEGTTAQTPAPAPTPTAMVPAVPAATTTTTLVTTTPGSTGGQGSFDLFGKKKRGRPRKYDADGNLRVSATPTPPPPGFTLSTPSEFSNKRGRGKHTAFGNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFTQNAHKSQKKKYQREQQTVVSPTSAVQETVTFARPISQANADGENFLMTMSQIPDQTQRESVSVSSDKQNLDATLDAATWNGSEEYSDQRTSPDINISLPDE* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2301 377 MobiDBLite consensus disorder prediction 89 103 - -
Pvu7g2301 377 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 38 376 - -
Pvu7g2301 377 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 276 IPR005175 -
Pvu7g2301 377 SUPERFAMILY AF0104/ALDC/Ptd012-like 159 282 - -
Pvu7g2301 377 Gene3D - 162 296 - -
Pvu7g2301 377 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 376 IPR039605 GO:0003680
Pvu7g2301 377 MobiDBLite consensus disorder prediction 353 371 - -
Pvu7g2301 377 MobiDBLite consensus disorder prediction 1 53 - -
Pvu7g2301 377 ProSiteProfiles PPC domain profile profile. 157 301 IPR005175 -
Pvu7g2301 377 MobiDBLite consensus disorder prediction 1 59 - -
Pvu7g2301 377 MobiDBLite consensus disorder prediction 72 122 - -
Pvu7g2301 377 MobiDBLite consensus disorder prediction 353 377 - -
Pvu7g2301 377 CDD DUF296 162 275 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2301 Pvu-Chr7 46387090 46391125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2301 91 345 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 49.442 1.83e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2301 - - gmx:100779227 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2301 7 46387090 46391125 Pvu7g2301 7 46387090 46391125 ECH