Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2290 ATGGAAATGGAAGATCACCATCACCACCACCACCATCAGCATCAACATCAGCATCAGCATCAGCATCAACACCACTTTGGCGTGAACGATCTCAGGCAAGTCGTCAATGGGCCGAGGACCTCCAACAACAACAACTACCCCTCCATGCCGCCGCACCCAACGGTCGAGCTTTTCCCCGGCCACCGGAATCTCACACCCTTGCCCATTCCCCAACACCATCAACAACACTACGAGGTCATGATGTTCGGTCGTGACATAATGCCACCTAGCCTTCACGACTTCGCTTCCACACCCCATGATTCTGTTGCTGCAGCAGCAGCAGCCACCATGACTCTACCCACTCCACCTACCTTTGATGCCGAGGGTGCAGGTTGCATCGGTGGAGACCCCTCCACTGGAAGATGGCCCAGACAAGAGACCCTCACTCTCCTTGAGATCAGATCTCGCTTGGACCCTAAATTCAAAGAGGCTAATCACAAAGGACCCCTGTGGGATGAAGTCTCCAGGATCATGTCTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACAAAAGATGGTAAGGCGGGAAGGCATGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAATAGTAGCACAGTTTCAGTCCCAGAAACCAATGTTGTTGGCAGCATTCATTTTCAAGCAAGCAGCCATGCCCCCTCCCAGACCAATCAAGATAAGTTTCAGTCTCACAATAGCAAGAATTGTGATAGCCTCAGCCTCACCAACTCCACTAACTTTGATACAACATCATCTGATGATGACAATGACCACCATAGCATGGAGAATGAGTCCATAGAGAAGAGGAGAAAGAGCAACAGTGGGAGGAGTTGGAAGGTGAAGATAAAAGATTTCATTGACTCGCAGATGAGGAAGCTTGTGGAGAAGCAGAAGGAGTGGTTGGATAAACTGGTGAAGACACTGGAAGAGAAGGAGAAGGAGAGGATGTTAAGAGAGGAAGAATGGAGGAAACAAGAGGCAAACAGGTTAGAGAGGGAGCAAGAGTTTTGGGCCAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTACAAAAGCTGACTGGAAGAGAAATAATGAAGGCCGAAACTCCCAATGATGGTATAAATATAACGGCTGCTGAAGTTCAAAACCATAGTGAAAACCAGAATAATGAAGATGAGAGTATAATGTTAAACAGCAGCAATGTTATCAGAGGTGCTGATAGGTGGCCAGAATCTGAAATCACAAGGCTTCAACAGCTGAGAGCTGAGATAGAGACAAGGTTTCCATATAGTGAAATTTCAGAAGAGGTTTCATGGGATGTAGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAGAAATGGGAAAGTATCAGTAACTATCCAAGGGAGGGTGACAATAAGGAAGATAGCAAGAAGTGCAAGGAAAACTCTAGAAGCTGCTTTTACTTCAAGAACAACGATGATCATAGACAATCTTCCTTATACGACCAAGGAAATGCCTATTGTGATGATATCAGTGATCAAGGGAAAGAGATTGAGAGGCTACAAACAAATAATAGTTCTTTACCTTCAAAATCCAATGCTGGAAATGTTGATCCCTCTGATAGTTGCTTCCCCTTCTTGATGAGTACCGAGAGTGGAAACTTGTGGGAGAACTACGGCCTAAAGCTCAATAAAGAAAACCAAAACCATTGA 1800 0.4522 MEMEDHHHHHHHQHQHQHQHQHQHHFGVNDLRQVVNGPRTSNNNNYPSMPPHPTVELFPGHRNLTPLPIPQHHQQHYEVMMFGRDIMPPSLHDFASTPHDSVAAAAAATMTLPTPPTFDAEGAGCIGGDPSTGRWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKDGKAGRHDGKHYRFFRQLEALYGENSSTVSVPETNVVGSIHFQASSHAPSQTNQDKFQSHNSKNCDSLSLTNSTNFDTTSSDDDNDHHSMENESIEKRRKSNSGRSWKVKIKDFIDSQMRKLVEKQKEWLDKLVKTLEEKEKERMLREEEWRKQEANRLEREQEFWAKERAWIEARDAALMEALQKLTGREIMKAETPNDGINITAAEVQNHSENQNNEDESIMLNSSNVIRGADRWPESEITRLQQLRAEIETRFPYSEISEEVSWDVVATKMACFGYERSALMCKEKWESISNYPREGDNKEDSKKCKENSRSCFYFKNNDDHRQSSLYDQGNAYCDDISDQGKEIERLQTNNSSLPSKSNAGNVDPSDSCFPFLMSTESGNLWENYGLKLNKENQNH* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2290 599 MobiDBLite consensus disorder prediction 279 301 - -
Pvu7g2290 599 Coils Coil 322 349 - -
Pvu7g2290 599 MobiDBLite consensus disorder prediction 1 57 - -
Pvu7g2290 599 MobiDBLite consensus disorder prediction 244 301 - -
Pvu7g2290 599 CDD GT1 435 498 - -
Pvu7g2290 599 ProSiteProfiles Myb-like domain profile. 435 493 IPR001005 -
Pvu7g2290 599 ProSiteProfiles Myb-like domain profile. 127 192 IPR001005 -
Pvu7g2290 599 Gene3D - 135 197 - -
Pvu7g2290 599 Gene3D - 436 497 - -
Pvu7g2290 599 PANTHER - 41 594 - -
Pvu7g2290 599 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 41 594 - -
Pvu7g2290 599 MobiDBLite consensus disorder prediction 34 50 - -
Pvu7g2290 599 MobiDBLite consensus disorder prediction 244 278 - -
Pvu7g2290 599 Pfam Myb/SANT-like DNA-binding domain 434 520 IPR044822 -
Pvu7g2290 599 Pfam Myb/SANT-like DNA-binding domain 134 220 IPR044822 -
Pvu7g2290 599 CDD GT1 134 199 - -
Pvu7g2290 599 SMART sant 432 495 IPR001005 -
Pvu7g2290 599 SMART sant 131 194 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2290 Pvu-Chr7 46249338 46253082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2290 134 595 Trihelix Transcription Factor Family AT5G03680 47.917 1.94e-130 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g2290 Myb_DNA-bind_4 7.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2290 - - aprc:113870891 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2290 7 46249338 46253082 Pvu7g2290 7 46249338 46253082 ECH
Pvu1g1936 1 45258083 45261720 Pvu7g2290 7 46249338 46253082 PCT