Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2285 ATGGACTTGCAGTTGAAGCAATGGAGAAACCACCATGAGTCAGAACAACAACATTCCCCAAACATGCCAAAGTTTCTCCCTCAACACCATCCACCACCTGCCTGTGCAGCACTCCCTCTCTTTCTACCTCAACCCAGCACCAAAGTCATCATTCTGCCATCTTTTTCTGATTCCACCCTACCTTCTGCACCTCCCAGATTTCCCAGGAAGGAGAGTTGTTTCAGCTTTGCACAGCGGCAAGAGCTTGAGTTGCAGTCTCTGATATTCAGGTACATGCAGGCCGATGCACCTGTTCCTCCTCAGCTGCTTCAACCAATCAAGAAAAGCTTCCTTCATTACCCTCCCCTTTTCCTTCATCTTTATCACCCTGCATTGTTGGAATCAGGGTACTATTGGAGAAGAGAAGCAGAGGATCCGGAGCCAGGGCGGTGCCGGAGGACGGACGGGAAGAAGTGGCGGTGCTCGAGGGAGGCGATGGATGATCAGAAGTACTGCCAGCGGCACATGCATCGTGGCCGTAACCGTTCAAGAAAGCCTGTGGAACAATCTAATGCTCCATCTTCTTCACCCTCTCCTTTCTTCAAACATCATCATCTCCTTCACCTCAATCAGAGTTCCTCTGGGGCCAAGAGTGACAGCAAGAGTTTGTCTGAAAACCATGATCCTGTGGATGGGGATGGCAGATCTGGTGGCCATGTCCTGAGGCATTTCTTTGATGATTTGCCAAGGACACTGCCAGAGCCTGACCATGGTGAAAACAATGGTATCCAGAGCAACAACAATGGAACATATCTTTCTATGTCTACACCAGGAATCACTTCCTCGGATGTGTCATTGAAACTGTCCACTGGTCATGCTTCAATGGAAGGACCACTTGCAGAGGCACTGAGATCATCCACCTCCACTTCTTCACCAACCAGTGTTCTGCTACAGTTGCCAACTAGTTCTGCTTGTGAGACAAACTTCATTAGCATGTAA 978 0.4918 MDLQLKQWRNHHESEQQHSPNMPKFLPQHHPPPACAALPLFLPQPSTKVIILPSFSDSTLPSAPPRFPRKESCFSFAQRQELELQSLIFRYMQADAPVPPQLLQPIKKSFLHYPPLFLHLYHPALLESGYYWRREAEDPEPGRCRRTDGKKWRCSREAMDDQKYCQRHMHRGRNRSRKPVEQSNAPSSSPSPFFKHHHLLHLNQSSSGAKSDSKSLSENHDPVDGDGRSGGHVLRHFFDDLPRTLPEPDHGENNGIQSNNNGTYLSMSTPGITSSDVSLKLSTGHASMEGPLAEALRSSTSTSSPTSVLLQLPTSSACETNFISM* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2285 325 Pfam WRC 139 181 IPR014977 -
Pvu7g2285 325 MobiDBLite consensus disorder prediction 164 234 - -
Pvu7g2285 325 ProSiteProfiles WRC domain profile. 138 182 IPR014977 -
Pvu7g2285 325 Pfam QLQ 74 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu7g2285 325 MobiDBLite consensus disorder prediction 214 234 - -
Pvu7g2285 325 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu7g2285 325 PANTHER - 11 286 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu7g2285 325 PANTHER GROWTH-REGULATING FACTOR 3 11 286 - -
Pvu7g2285 325 MobiDBLite consensus disorder prediction 1 28 - -
Pvu7g2285 325 MobiDBLite consensus disorder prediction 1 18 - -
Pvu7g2285 325 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2285 Pvu-Chr7 46182086 46185190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2285 1 316 GRF Transcription Factor Family AT3G52910 41.176 5.73e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu7g2285 WRC 5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2285 - - gmx:100817197 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2285 7 46182086 46185190 Pvu7g2285 7 46182086 46185190 ECH
Pvu1g1941 1 45365410 45368715 Pvu7g2285 7 46182086 46185190 PCT