Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2270 ATGAAAATTCCTTTTTTTACTTGTTTTTCTTCAGCCACCAAAGAACACAAGAATAACGACAACCCAGAGGGAGAGATCAACGATGGGAGCTTCCGTTTGTTCACTTACAACCAATTGAAATTGGCCACGCGTAATTTCCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGCTCTGTCTATAAGGGGAGGCTTCTGGATGGTTCTTTTGTGGCGGTGAAGGTGCTTTCGGTTGAGGTGGAATCCATGCGAGGAGAGAGGGAATTTGTGGCGGAATTGGCTACACTTGCAAACATCAAGCACCAAAATCTTGTAAGCTTGAAAGGGTGTTGTGTGGAAGGTTTCCATAGATATTTGGTCTATGATTATATGGAGAACAATAGCCTTTACAAAGCTTTTTTAGGTTCGGAGGAGAGAAGAATGAGATTCAGTTGGCAAACAAGGAAGGAAGTATCCATAGGGGTTGCTCGGGGACTTGACTTTCTCCACGAAGATCTTAAGCCTCATATCGTACACAGAGACATCAAAGCCAAAAATATTCTTCTTGATCGGAATTTCACTCCAAAGGTTTCAGATTTCGGTTTGGCAAAATTGCTAAGAGACGAAGCTTCTTACATCAGCACTCGGGTTGCAGGGACACTGGGTTATCTAGCTCCAGAATATGCCAATTCTGGACAGGTTTCACGAAAATCAGATGTTTACAGCTTTGGAGTGCTGCTTCTGCAAATTGTGAGTGGCCTAGCAGTGGTGGATGCCTATCAAGACTTTGAACGTTTCATAGTGGAGAAGGTGTGGATAGCGTATCAATCTAACGATTTATTAAAACTGGTGGATCCCATGTTGAACAAAAATTTTCCGGATGAAGAAGCCATAAAGTTCCTCAAGGTGGGGCTACTATGTGTGCAAGAAACCGTGAAACTTCGGCCACGAATGTCAGAGGTTGTGGAGAAATTAACCAACAACGTTGATATGAAAGATGTTCACATTTCGAAACCAGGGTTCGTTGCTGATCTCGGGAAGATCAGAATCAAAAAACAAAACTCTTCCCACGAAAGAAGTTCAGCTGGAGCAACCTTCACAAGCTCCATTTGGAGTTCATTCAATCTTGCTCGTTAG 1116 0.4319 MKIPFFTCFSSATKEHKNNDNPEGEINDGSFRLFTYNQLKLATRNFHSSEKVGEGGFGSVYKGRLLDGSFVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGFHRYLVYDYMENNSLYKAFLGSEERRMRFSWQTRKEVSIGVARGLDFLHEDLKPHIVHRDIKAKNILLDRNFTPKVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQDFERFIVEKVWIAYQSNDLLKLVDPMLNKNFPDEEAIKFLKVGLLCVQETVKLRPRMSEVVEKLTNNVDMKDVHISKPGFVADLGKIRIKKQNSSHERSSAGATFTSSIWSSFNLAR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2270 371 PANTHER RECEPTOR-LIKE KINASE 7 344 - -
Pvu7g2270 371 Pfam Protein kinase domain 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2270 371 CDD STKc_IRAK 52 320 - -
Pvu7g2270 371 SUPERFAMILY Protein kinase-like (PK-like) 24 318 IPR011009 -
Pvu7g2270 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Pvu7g2270 371 SMART serkin_6 46 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2270 371 ProSiteProfiles Protein kinase domain profile. 46 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2270 371 Gene3D Phosphorylase Kinase; domain 1 7 123 - -
Pvu7g2270 371 Gene3D Transferase(Phosphotransferase) domain 1 124 331 - -
Pvu7g2270 371 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Pvu7g2270 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2270 Pvu-Chr7 46019744 46021945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2270 34 362 Receptor kinase-like Gene Family AT1G07650 45.181 7.80e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g2270 Pkinase 5.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2270 - - gmx:100813945 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1832 1 44029349 44031573 Pvu7g2270 7 46019744 46021945 PCT