Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2269 ATGCAAACTCTCGCTACCCTTCTTCTCATTTTCCTCATCTTGTGTGGCACTGCACATGGGTTCGGCGCCATGGGTCCAATAACCGCTTCATTTGCAAAAGACGAGGTTTTTTGTGCCATTGATGCTAGCGGGAAGCAAGACGTCATTTGCTGGGGGAATAACGCCACTTCACCGTCTCTCTCCTCCGTTACCAATGCTGTTCCTGCCATGTCAGCACTCTCCGGCGGGGAAGGCTTTCTATGCGGCATTTTAGCGAACACCTCGCAGGCGTTTTGCTGGGGCGCTGTAACGAAACCCAGCGCAGATCTCATCCTCGTGCCGCCGGCGTACCGGAACACTGCTTATTCCCACATCGCCGCCGGCAAGAATCACGTGTGCGCTGTTCGAGGATCCTACTACGCCGATCACGATTCCGGCACCGTGGATTGCTGGGATATCACGACAACTGTAAACAAAACGTTGACAGCGAAACAGAGTTACTTGTTTTTCAACCAAGCCGTGATGAATCTGGAGGTGAAGAGGGTTGTTTCCGGGGAAGGGTTCACCTGTGGCGAGGTCAGAGACGGTGGACTCGTATGTTGGGGACCTAAGTCTGAAGGGATAAAAGTTTCCAATGTTTCCGAGAGTTTCGCGGTTTTAGCGGCGGGTCGGAGGGCCGTGTGCGGTGTTTTCAACGTTTCCGGCGAGTTGAAATGCTGGGGCGACCCGGGTTCGTTTTCGGATCCTCCGCTGGATTCGGTTCGACTGGTGTCTCTATCTGCTGGGGCTAACCATTTTTGCGGCATTAGAATGGATAACCATGAAGTAGAGTGTTGGGGTGATTTGAACTCTTCTGTGATTCCTCGAGGGAACGGTTTCATGGCTATTGCTTCTTCGGATTTCACCACGTGTGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGATGGTAAATGCTTTGAAACCCGATTTTGATCCTCCTTTGGAGCTTTCGAGTCCTGGACTCTGCAGGGCTAGTTCTTGTGGGGTCGATGAGTTTGCTTTCAATGCTAGTATGCTTAACGAGCTAGCTTTGACTAGCCTCTGTGTTAGAGAGGATTTGAGGATTTGTTCTCCTTGTGGGTCAAATTGTTCTAAAGGGTTCTTCTTGTCAAGTTCGTGTACTAAAAATGCTGATAGAGTCTGCACTGCTTGTTCTCTTTGTCAGAACAGCTCTTGTTTCAGTGTTTGTGGACTTCACTCCTCAACGGGTCTACGTATGCATTGGCGCTGGCATGGTTTGCGTAAATGGATGGTTATAGTTGGGTGCTCCGTGTTGGGGGTTCTGATAATTTTGCTTTACGGGTGTCTTTTATCGGTCAGAAAGAGGACAAAGAAACAATCCAAGTCTTGCATGGGGAAACCGGAGCAAGAGGATGATAATGTCAATGTTGCTCTTCAATCAACACCTTCTGTTAATTCTTGTCCCGGGGCGCCTCAGGTTTTCAGACTTTCTGAACTGAAGGATGCTACGAATGGGTTTAAGGAGTTTAATGAACTTGGGAGAGGAAGTTATGGGTTTGTATACAAAGCTTTGTTGGCAGATGGGAGGGTGGTTGCTGTTAAAAGAGCAAATGCGGCTACCATAATCCACACCAATAATCGTAATTTTGAAATGGAACTAGAAATTCTCTGCAAAATCCGCCATTGTAATATTGTTAATTTGCTGGGGTACTGCGCAGAGATGGGGGAGAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACGCTTTATGATCACCTCCACGGTGGTCTTTCTCCCCTTAATTGGAGCCTCAGGTTGAAGATAGCGATGCAAGCCGCAAAGGGGCTTGAGTATCTTCACAAGGAACTTGTTCCTCCAATTGTGCATAAAGATCTAAAAAGTTCAAACATTCTTTTGGATTCGGAGTGGGGGGCAAGAATTTCGGACTTTGGACTTCTTGCTTCGAGTGACAAAGATCTCAATGGAGACATAGATAGCGATGTTTACGATTTTGGGATTGTGATGCTAGAGATTCTGAGTGGAAGAAAGGCTTATGATAGGGATTACACTCCACCCAGCATGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAGGCTGCTGCTACTATTGATAGGTACGTAGCTCTTCCAAGAAATGTTGAACCTTTGCTTAAGCTTGCTGATATAGCAGAACTTGCTGTGAGAGAGAATCCAAGTGAACGACCACCTATGTCCGATATAGCATCTTGGCTGGAACAAATTGTGAAGGAAGGATTGATCTTATAG 2274 0.4736 MQTLATLLLIFLILCGTAHGFGAMGPITASFAKDEVFCAIDASGKQDVICWGNNATSPSLSSVTNAVPAMSALSGGEGFLCGILANTSQAFCWGAVTKPSADLILVPPAYRNTAYSHIAAGKNHVCAVRGSYYADHDSGTVDCWDITTTVNKTLTAKQSYLFFNQAVMNLEVKRVVSGEGFTCGEVRDGGLVCWGPKSEGIKVSNVSESFAVLAAGRRAVCGVFNVSGELKCWGDPGSFSDPPLDSVRLVSLSAGANHFCGIRMDNHEVECWGDLNSSVIPRGNGFMAIASSDFTTCGIREDDLLLDCWMVNALKPDFDPPLELSSPGLCRASSCGVDEFAFNASMLNELALTSLCVREDLRICSPCGSNCSKGFFLSSSCTKNADRVCTACSLCQNSSCFSVCGLHSSTGLRMHWRWHGLRKWMVIVGCSVLGVLIILLYGCLLSVRKRTKKQSKSCMGKPEQEDDNVNVALQSTPSVNSCPGAPQVFRLSELKDATNGFKEFNELGRGSYGFVYKALLADGRVVAVKRANAATIIHTNNRNFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDIDSDVYDFGIVMLEILSGRKAYDRDYTPPSMVEWAVPLIKQGKAAATIDRYVALPRNVEPLLKLADIAELAVRENPSERPPMSDIASWLEQIVKEGLIL* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2269 757 SMART serkin_6 501 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2269 757 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 24 755 - -
Pvu7g2269 757 ProSiteProfiles Protein kinase domain profile. 501 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2269 757 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Pvu7g2269 757 Gene3D - 157 319 IPR009091 -
Pvu7g2269 757 Gene3D Phosphorylase Kinase; domain 1 464 578 - -
Pvu7g2269 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Pvu7g2269 757 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 334 389 IPR001368 GO:0005515
Pvu7g2269 757 Gene3D Transferase(Phosphotransferase) domain 1 579 754 - -
Pvu7g2269 757 Pfam Protein kinase domain 501 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2269 757 SUPERFAMILY Protein kinase-like (PK-like) 477 748 IPR011009 -
Pvu7g2269 757 PANTHER OS01G0750732 PROTEIN 24 755 - -
Pvu7g2269 757 Gene3D - 20 156 IPR009091 -
Pvu7g2269 757 SUPERFAMILY RCC1/BLIP-II 25 278 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2269 Pvu-Chr7 45993695 45996771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2269 39 748 Receptor kinase-like Gene Family AT5G47850 27.871 1.37e-73 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu7g2269 Pkinase 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2269 - - gmx:100814476 1387.47