Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2258 ATGCTGAAGACTTTTGTTGGGAAGATAGAAAAGGGTCTTTCAGTTTTTGTACACAGAAGGCAACCACTGAGGTACTACAGTGAAGCCACGCCAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAACCAAAGGTGGAGAATCCAAAAGATTCATTGTTGAGTTACATTACTTGAATGATCCTGCTTTCTTAGGACTGTTGGATCAAGCAGAAGAAGAGTTTGGTTTCAGGCAAAAGGGAGCTCTTGCAATCCCTTGTCAACCTCAAGAACTACAGAAGATTCTAGAGGGTCGTAGAGCATAG 306 0.4216 MLKTFVGKIEKGLSVFVHRRQPLRYYSEATPDDVREGYFAVLATKGGESKRFIVELHYLNDPAFLGLLDQAEEEFGFRQKGALAIPCQPQELQKILEGRRA* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2258 101 Pfam Auxin responsive protein 28 96 IPR003676 GO:0009733
Pvu7g2258 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 100 IPR003676 GO:0009733
Pvu7g2258 101 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2258 Pvu-Chr7 45921645 45922439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2258 27 88 Calmodulin-binding Proteins AT5G20810 50.000 3.67e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2258 - K14488 gmx:100775971 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2258 7 45921645 45922439 Pvu7g2258 7 45921645 45922439 ECH