Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2247 ATGAACAACCTCACACTTGCATCCATTCTCACTGTGATTTCTGCATTACTCTTCTTATCAACTCATTTCACTAACACCCCAACAAGATCCTCAGAAAAACACCTCCATTTCCACAAGCACATGCAAGTAGCCCAATCCACGTGCCAAGGAACACTCTACCCCGACCTATGTGTCTCAACCCTTGCCACATTCCCAGATCTTACCTCAAAATCTGTCCCACAAGTCATTTCTTCTGTGGTCAACCATACCATGTACGAGGTAAAATCATCCTTCTACAACTGCAGCAGCCTCAAAAAGAAGATCAGAAATCTCAACCCACTCGATCAGAGAGCCCTCGACGACTGTCTCAAACTGTTCCAAGACACCAACCTGGAGCTCAAAACCACCATCGACGATCTCTCCAAGAGCAGCATAGGGTCCAAGCGCCACCATGACTTGCAGACTCTGCTCAGCGGAGCAATGACCAACTTGTACACGTGCCTCGACGGCTTTGCTTACAGCAAAGGGCGTGTGAGAGACAGAATCGAGAAGAAGTTGCTTGAGATATCACATCACATGAGCAACTCCTTGGCCATGCTGAAGAAAGTTCCTGGAGTGAAGACAAGAACTTCGAAATCCGAGGTGTTCCCCGAATATGGAAAGATGAAAAAGGGTTTCCCCTTGTGGGTGTCTCCCAAAGACCGAAAGCTTCTTCAAGCGTCTGTGAATGAATCCAAGTTCGATCTCGTCGTTGCCAAAGATGGCACTGGCAATTTCACCACTATAGGGGAAGCACTAGCTTTGGCTCCCAACTCCAGCACAACCAGGTTTGTGATACACATAAAGGAGGGGGCATATTTCGAGAACGTGGAAGTGATCAGGAAGAAGACGAATCTGATGTTTGTTGGAGACGGCATTGGGAAGACAGTAGTAAAAGGCAGTAGGAACGTTGTGGACGGGTGGACAACTTTTCAATCAGCTACTGTTGCTGTTCTAGGAGAAGGATTCATAGCAAAGGGTATAACTTTTGAGAACTCAGCAGGGCCAGAGAAACACCAAGCAGTGGCCCTGAGAAGTGGTGCTGACTTCTCGGCTTTTTTCCGTTGCAGTTTTGTTGGCTACCAAGACACACTTTATGTGCATTCCCTACGCCAGTTCTATCGTGAATGTGACATTTATGGCACTGTAGACTTCATTTTTGGCAATGCAGCTGTGGTGTTCCAAAACTGCAACTTATACGCACGCAGGCCAAACGAAAATCAAAAGAACTTGTTCACTGCGCAAGGCAGAGAGGATCCTAACCAAAACACTGGCATATCCATCTTCAACTGCAAGATTGCAGCTGCCTCAGATTTAATCCCTGTCAAATCCTCCTTCAAGAGCTACCTAGGTCGTCCATGGAAAACGTACTCAAGAACTGTTTATCTAAAATCTTACATAGAGGATCTGATTGACCCAGCAGGGTGGTTGGAATGGAATGACACATTTGCATTGGATACACTGTATTATGGAGAGTACATGAATAGGGGTCCAGGTTCAAACACAAGTGCCAGAGTTACATGGCCAGGTTATAGGATCATAAACAGCTCCACTGAGGCAAGCCAATTCACAGTTGCTCAGTTTATCCAAGGCAATGATTGGTTGAACACCACTGGCATTCCATTCCTCTCTGGTTTGAGTTGA 1662 0.4627 MNNLTLASILTVISALLFLSTHFTNTPTRSSEKHLHFHKHMQVAQSTCQGTLYPDLCVSTLATFPDLTSKSVPQVISSVVNHTMYEVKSSFYNCSSLKKKIRNLNPLDQRALDDCLKLFQDTNLELKTTIDDLSKSSIGSKRHHDLQTLLSGAMTNLYTCLDGFAYSKGRVRDRIEKKLLEISHHMSNSLAMLKKVPGVKTRTSKSEVFPEYGKMKKGFPLWVSPKDRKLLQASVNESKFDLVVAKDGTGNFTTIGEALALAPNSSTTRFVIHIKEGAYFENVEVIRKKTNLMFVGDGIGKTVVKGSRNVVDGWTTFQSATVAVLGEGFIAKGITFENSAGPEKHQAVALRSGADFSAFFRCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARRPNENQKNLFTAQGREDPNQNTGISIFNCKIAAASDLIPVKSSFKSYLGRPWKTYSRTVYLKSYIEDLIDPAGWLEWNDTFALDTLYYGEYMNRGPGSNTSARVTWPGYRIINSSTEASQFTVAQFIQGNDWLNTTGIPFLSGLS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2247 553 PANTHER PECTINESTERASE 10 549 - -
Pvu7g2247 553 Pfam Pectinesterase 241 538 IPR000070 GO:0030599|GO:0042545
Pvu7g2247 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 198 IPR035513 -
Pvu7g2247 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Pvu7g2247 553 PANTHER PECTINESTERASE 10 549 - -
Pvu7g2247 553 CDD PMEI-like_3 46 198 - -
Pvu7g2247 553 Pfam Plant invertase/pectin methylesterase inhibitor 45 192 IPR006501 GO:0004857
Pvu7g2247 553 Gene3D - 235 552 IPR012334 -
Pvu7g2247 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Pvu7g2247 553 SMART PMEI_2 39 192 IPR006501 GO:0004857
Pvu7g2247 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 195 IPR006501 GO:0004857
Pvu7g2247 553 SUPERFAMILY Pectin lyase-like 238 551 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2247 Pvu-Chr7 45735692 45739698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2247 68 548 Carbohydrate Esterase AT4G02320 56.680 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2247 K01051 - gmx:100802881 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2167 1 47289476 47291438 Pvu7g2247 7 45735692 45739698 PCT
Pvu7g2247 7 45735692 45739698 Pvu1g2168 1 47298378 47303278 PCT