Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2240 ATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGGCCGCTGCGTGGCTGCCTCTGAGCTCTGGCCAAACTCCTTCGGAAAGGACGATGACTTTGCCTTCGGTTACTCCAACATCGCTAAACAAGAGCCCTCCACTCTCAAAACGGCCCAACCTCCCAAAGTTAGTGAGAAAGTTGAGACCAAACCAATGAAAAGGCAGAGGAAGAATCTCTATAGAGGGATTCGGCAGCGCCCTTGGGGCAAATGGGCTGCGGAGATTCGCGATCCTAGAAAAGGGGTTCGTGTCTGGCTGGGCACCTTCAACACTGCTGAAGAAGCCGCAAGGGCTTATGATCGTGAAGCTCGAAAAATCCGCGGGAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGATGATTATTCCATTCAAGCTCGTAATCCAATTCCACCTCTTCCTTTCGCAACACAAAACGCTGCCCCGTATCAGCAACAGTACCGCTGTGATCTCAATAATGCCCCTTCAAATCTCAACTTCGAGTTCGGTTATGACCTGAACCACACTGGGGCATTTTCATCCCACGTGGACGCTGTCAAAGCTGACTCGGTTGTTGTTTCCGGCGACGAAAATTCAGGGTTAGCGTCGGGTTCAGAGGGCGCTCATTCTACAAGCGAGTTCATGGGGTCTTGTCAGAAGGTGAACGGTTATTTTAGTAGTACAGTGGTTGAGAAGGAGAAAGAGATAGAGGTGATCGGAGCTGAAGAGGAAAAGAACAAATTGCAGGAGCTTTCTGAGGAACTGATGGCTTACGAGAACTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCTATGCCACCGAATAATGTTCAGGAAAGTATTGTCGGGGATCTATGGAATTTCGATTGA 900 0.49 MCGGAIIADFIPRRGRCVAASELWPNSFGKDDDFAFGYSNIAKQEPSTLKTAQPPKVSEKVETKPMKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDDYSIQARNPIPPLPFATQNAAPYQQQYRCDLNNAPSNLNFEFGYDLNHTGAFSSHVDAVKADSVVVSGDENSGLASGSEGAHSTSEFMGSCQKVNGYFSSTVVEKEKEIEVIGAEEEKNKLQELSEELMAYENYMKFYQIPYYDGQSMPPNNVQESIVGDLWNFD* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2240 299 Coils Coil 238 268 - -
Pvu7g2240 299 MobiDBLite consensus disorder prediction 45 68 - -
Pvu7g2240 299 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Pvu7g2240 299 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Pvu7g2240 299 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Pvu7g2240 299 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Pvu7g2240 299 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Pvu7g2240 299 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Pvu7g2240 299 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Pvu7g2240 299 PANTHER EREBP TRANSCRIPTION FACTOR 1 275 - -
Pvu7g2240 299 PANTHER DNA-BINDING DOMAIN 1 275 IPR044808 GO:0003700|GO:0009873
Pvu7g2240 299 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2240 Pvu-Chr7 45677796 45679996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2240 1 131 AP2-EREBP Transcription Factor Family AT3G16770 55.882 8.90e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g2240 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2240 K09286 - gmx:100780763 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2240 7 45677796 45679996 Pvu7g2240 7 45677796 45679996 ECH