Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2219 ATGGGAAGAGCTCCTTGTTGTCAGAAAGTGGGGCTGAAGAAGGGGAGGTGGACAGCAGAGGAAGATCAGATCCTGGCAAAATACATTCAGGCCAATGGAGAAGGTTCTTGGAGGTCATTGCCTAAAAATGCAGGATTATTGAGGTGTGGGAAGAGTTGCAGACTGCGATGGATTAACTATTTGAGAGCTGACCTTAAAAGAGGGAACATTTCGGCTGAAGAGGAAAACACCATCGTCAAGTTGCACGCTTCTCTGGGTAACAGGTGGTCTTTGATAGCAAGTCATTTGCCAGGAAGAACAGACAACGAGATTAAGAACTACTGGAATTCTCATCTGAGCAGAAAAATTTACAGTTTCCCAAGGATGGAGAAGCAACAAGGTGCAGGTGCCCTGGATCCACCTAAAGTGGTGTGTATTCCTCCCAAGCGAAAAGGTGGCAGAACAAGCCGTTGGGCAATGCAGAAGAACAAAAACTACACCCAAAATTCAGACAAACCCAAACACAGTTTCAGTGAACAGAATAGCAGTGACAGCAGAGTTCCGAAGGCAGCGGAGAGCGAGGGTTTGTTGAACGGCGTTAGGGAGTGGAAGGCGGCGGAGGTAGATGAAAAGTGTGAGAAGGAGAAAAGTGGCGGTGGGGAGGTGGTGGAAGTGTGTGAATTTGAGGGCATTGATGAGGGGAGTGGGGCGTTGGGCATTAGTGAGATGTTGGAAAGTTACTTGGCGGAAACATGTGGGGTTTGGGACATAAGTGAGGAGAGAGAGAGCAATGACGCAGAAGTGGTGGGTGTTGCTGATGCGTGTCCCAGCAAAACGAGGTCGTTCGATAGTAGCGTGAATAAACTGTGGGATTGGGAGAGCGTGATAGAGTTCGATAACATTTCTGAGTCCCAACTCATTTCTGAGCATTCCGATGAGAAAGATAAATTCCTCACTTGGCTGTGGGAGGACGATGATTGGGAAAGCGATGGCAACAAATTGGGAGAGACAGATTCGCAGATACAAAACGAGGTTGTTGATTGGCTTCTCTCTTGA 1035 0.4783 MGRAPCCQKVGLKKGRWTAEEDQILAKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISAEEENTIVKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYSFPRMEKQQGAGALDPPKVVCIPPKRKGGRTSRWAMQKNKNYTQNSDKPKHSFSEQNSSDSRVPKAAESEGLLNGVREWKAAEVDEKCEKEKSGGGEVVEVCEFEGIDEGSGALGISEMLESYLAETCGVWDISEERESNDAEVVGVADACPSKTRSFDSSVNKLWDWESVIEFDNISESQLISEHSDEKDKFLTWLWEDDDWESDGNKLGETDSQIQNEVVDWLLS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2219 344 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu7g2219 344 PANTHER MYB TRANSCRIPTION FACTOR 2 323 - -
Pvu7g2219 344 MobiDBLite consensus disorder prediction 151 181 - -
Pvu7g2219 344 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu7g2219 344 CDD SANT 16 61 IPR001005 -
Pvu7g2219 344 Gene3D - 71 116 - -
Pvu7g2219 344 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 323 - -
Pvu7g2219 344 MobiDBLite consensus disorder prediction 126 186 - -
Pvu7g2219 344 Gene3D - 11 67 - -
Pvu7g2219 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu7g2219 344 CDD SANT 71 112 IPR001005 -
Pvu7g2219 344 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pvu7g2219 344 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu7g2219 344 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pvu7g2219 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu7g2219 344 SMART sant 66 114 IPR001005 -
Pvu7g2219 344 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2219 Pvu-Chr7 45475635 45479668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2219 1 344 MYB Transcription Factor Family AT2G47460 42.132 9.59e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g2219 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2219 K09422 - gmx:100814275 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2191 1 47516892 47521298 Pvu7g2219 7 45475635 45479668 PCT