Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2211 ATGAACTCAAAAAACAGTGTTCCCCAATTGCAATCAGAAATTGAGCACTTAGCTCAAATGTTACACCCAATGAAATCATCTTCAACAAACATGGCAAGGTTTTTGAGTTCAGTTCTTGATGATATTACCAATGTCTCCTTCTCTCATATTAAGACGAAGGTGGCTCCGTTAATGTTTGAAGCATTTCAGACGGTTCCATACTTGGTCCAAATCTCATACATAGGGGTAGAAGGTCTCTTTTTCTCCTACTACACTCATAATGATGAAGCTCTAGCTATGTACTCCAACTCATCATCATCAAGTTGGGGTGCCTTCAACAAAATCTACACTCAACCTGTGAATCGTGAAACTGGAGAGGTTCATGGTGAAGCCACAAACATAGTATCTAACCCTTTTATGAATGCAAGTTGGATTGGGGAAGCACTTAATGTGACAAGTGGGTTTTCCTCATTGGGAACCAAGTGGGACAATGGTGATCTTTTGTTCCTCACTTCAGCTGGAATCATGACAAGAGGAGTGATCTCTCTTGGCTTTTCTGCAACGCCAATAACTGATTTTGTCACTCGCATAGACCAACAACATGGCACAACGTCCTATTTAGCTACCAAAGATGAAAAAATTGTTGTGGAAGGGATTCAACTCACCCACTTCCTAATTTCTAATGATACAGTTTCGTTCCAATCAGTGGACGCAAATGGTGATCCCACAAGTAATGAGGGCACTGTCTCATGCAAGGATGGAGCTGTTGCTTCTTTTTTCAATATTCGGGATACTGCATATTCAATTCACTGCTACACTATTGATATAATGGGAATAGAATCGGTGTATGTGTTGGGTGTCCCAGAAGAAAGATATGGGAGAATTTATCAGAATTACAAGAAAAAGGGATTGATAGTGTTTGTGATAACGATGGTCACTATATTTGTAGCTTTCTTCAGTTTTCTATACATAAATTGTGAAGCCTTTAGGCGAGAAATGCATTTGTGTGCCTCACTCATCAAACAGTGTGAAGCCACCCAACAAGCTGAGAAAAAGAATATGAATAAGAGCGCCGCTTTTGCAAGTGCCAGCCATGATGTTCGTGCTTCTCTCGCAGGCATCACCGGTTTGATAGAGTTATCTTCAGAGTTGGTAGCCCCCGGTTCAGAATTGGAGACCAATTTGAAACAAATGAATGGTTGTACCCAAGACTTACTAGGACTGTTGAATTCTATACTAGACACAAGCAAAATAGAGGCAGGAAAAATGCAACTTGAGGAAGAGGAGTTTGATGTGTTCCATCTCCTAGAAGATGTAGTTGACTTCTACCATCCTGTGGCTGTGAAGAAAGGTGTAGATCTGGTGTTGGACCCTTGTAATGGTTCTGTTGTGGGATATTCTCGCGTGAAAGGTGATAGGGGCAAACTAAAACAAGTCTTGTGTAATTTACTGAGCAATGCTGTGAAATTTACTGATGAGGGACACATAGCAGTACGCGCATGGACTCGGAAGCCAAAATTATTGCAGAACTCAACGGTGACTTTTAACCAATTGGGTTCCAAGAAATATTTATCATGCTTATTTTGTAACGAAACTGAAGCACGTAGTGACGTGGAATCCACACGTTCAATCCAAGAAGATCCTCATTTTATGGATTTTATATTTGAAGTGGATGACACGGGAAAAGGAATTCCTAAAGAGAATTACAAGTCTGTTTTCGAGAATTACGTCCAAATAAAAAACACAGCTCTTGGTCAAGGAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCGTTGGTGCGTTTGATGCATGGAGATATTGAAATTGTTGAGAAGGATATTGGTGAAAAAGGGACATGCTTCAAGTTCAATGTGCTTCTCACTGTATGTGAGAATGAGGCACCATCAGATGGTAGCAGAAGGGAGGGTATTGGTTGTGGATCAGGAGACAGAATGCAAGGTCAGGAGCAAACTATGCACGCTTCATGTTCTGGTTCTTCTAGAATTTGTACCATGAGTCCAAGGTTACGTATTTGCAGCTCTAGTCCTAAGCCTGAGGCTTCCCTTGTGGTTCTTTTGATTGTTGATGAGGAGCGCCAAAGGACTTCACGGAGGTTCCTGGAGAGGTTAGGGATCAAAGTTAAAGTTGTGACTACAGAGAAAAGTCTGTTTTATACTCTTAGGAAGATCAAGCAGAAGGCTAAGCATTCTAGTGGCCATAATTCTCCAGGGTCTTCAGATTTGAGTTATTGCTCTACACCTCATAGTTCTCTTGACATAGCCACGAGAGTTTCTTTGGAGGGAACTGAGCTCATGCCTTTAGTTTTCAAGAAAACTGATATGGGAGCTTCTCCCTGCTTCATCCTTATTGTGATTGACGCAAATGCAGGACCCTTTTCTGAGCTTTACACGATTGTATCCAACTTCAAGAAAGACCTTCGCAACCCTTGCAAGGTTGTGTGGTTGGATAAGCCCTTTATGCGTAGAATCAACCTCAAGGCCCTTAATCAAGATGACATTGTCACATCCAAACCATTTCATGGAACTCGTTTGTTCCAAACCATAAAGCTCCTTCCTGAGTTTGGTGGTGCTTGGGAAAGCAATTCCAGTAGAGCTAAGAGGGAAATGACTAATGAGAGAGCTACATTAAAGACTTGCAAGGATCCAGGTTTGTCAAAATACACATTTCCTCTACTGGACAGATCGCAAGTGTCTTCAACTGATAAAAGTACATTTCAAACTACTGAACAAATTCGGAAGGGAAAACGACCATTCAAGGCAAAAATAACTCTTGTTCATCGAGGAGAAACGCAAGAGGTTGGAAACTCATCAGGGTGTCATAAACCCTTGAGGGGTAAGAAGTTTTTGGTTGCTGATGACACTTCATTTTTGCGCAATATAGCATCGGCTACTTTGATTTCTCTTGGTGCAACCGTGGAGCAATGTGAGAATGGTGAACAAGCAGTGAGGCTAGTTGACGAGGGTCTACCTCGGGAGTTTCCTCATCCTCCTTATGATTACATCTTAATGGATTGTCAGATGCCAATTATGGACGGGCTTGAGGCAACAAAGTGGATACGAAGGATAGAGAAAGCTTATGATATTCACATACCTATCATTGCGTTGACTGCTGGAACAGAAAGAATAACAATAGAGAGTGGAATGGACTATCATATGGTGAAACCGATTAACAGAGAGGAATTACTTAAAGCTATCACATATATAGATGGTAAAGGGTGA 3219 0.415 MNSKNSVPQLQSEIEHLAQMLHPMKSSSTNMARFLSSVLDDITNVSFSHIKTKVAPLMFEAFQTVPYLVQISYIGVEGLFFSYYTHNDEALAMYSNSSSSSWGAFNKIYTQPVNRETGEVHGEATNIVSNPFMNASWIGEALNVTSGFSSLGTKWDNGDLLFLTSAGIMTRGVISLGFSATPITDFVTRIDQQHGTTSYLATKDEKIVVEGIQLTHFLISNDTVSFQSVDANGDPTSNEGTVSCKDGAVASFFNIRDTAYSIHCYTIDIMGIESVYVLGVPEERYGRIYQNYKKKGLIVFVITMVTIFVAFFSFLYINCEAFRREMHLCASLIKQCEATQQAEKKNMNKSAAFASASHDVRASLAGITGLIELSSELVAPGSELETNLKQMNGCTQDLLGLLNSILDTSKIEAGKMQLEEEEFDVFHLLEDVVDFYHPVAVKKGVDLVLDPCNGSVVGYSRVKGDRGKLKQVLCNLLSNAVKFTDEGHIAVRAWTRKPKLLQNSTVTFNQLGSKKYLSCLFCNETEARSDVESTRSIQEDPHFMDFIFEVDDTGKGIPKENYKSVFENYVQIKNTALGQGGTGLGLGIVQSLVRLMHGDIEIVEKDIGEKGTCFKFNVLLTVCENEAPSDGSRREGIGCGSGDRMQGQEQTMHASCSGSSRICTMSPRLRICSSSPKPEASLVVLLIVDEERQRTSRRFLERLGIKVKVVTTEKSLFYTLRKIKQKAKHSSGHNSPGSSDLSYCSTPHSSLDIATRVSLEGTELMPLVFKKTDMGASPCFILIVIDANAGPFSELYTIVSNFKKDLRNPCKVVWLDKPFMRRINLKALNQDDIVTSKPFHGTRLFQTIKLLPEFGGAWESNSSRAKREMTNERATLKTCKDPGLSKYTFPLLDRSQVSSTDKSTFQTTEQIRKGKRPFKAKITLVHRGETQEVGNSSGCHKPLRGKKFLVADDTSFLRNIASATLISLGATVEQCENGEQAVRLVDEGLPREFPHPPYDYILMDCQMPIMDGLEATKWIRRIEKAYDIHIPIIALTAGTERITIESGMDYHMVKPINREELLKAITYIDGKG* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2211 1072 Pfam His Kinase A (phospho-acceptor) domain 350 414 IPR003661 GO:0000155|GO:0007165
Pvu7g2211 1072 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 337 416 IPR036097 GO:0000155|GO:0007165
Pvu7g2211 1072 Gene3D - 335 415 - -
Pvu7g2211 1072 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 403 617 IPR036890 -
Pvu7g2211 1072 SMART HisKA_10 348 414 IPR003661 GO:0000155|GO:0007165
Pvu7g2211 1072 SUPERFAMILY CheY-like 943 1066 IPR011006 -
Pvu7g2211 1072 SMART HKATPase_4 464 622 IPR003594 -
Pvu7g2211 1072 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 620 IPR003594 -
Pvu7g2211 1072 CDD HisKA 346 410 IPR003661 GO:0000155|GO:0007165
Pvu7g2211 1072 ProSiteProfiles Response regulatory domain profile. 947 1069 IPR001789 GO:0000160
Pvu7g2211 1072 Gene3D - 926 1068 - -
Pvu7g2211 1072 PRINTS Bacterial sensor protein C-terminal signature 546 560 IPR004358 GO:0016310|GO:0016772
Pvu7g2211 1072 PRINTS Bacterial sensor protein C-terminal signature 564 574 IPR004358 GO:0016310|GO:0016772
Pvu7g2211 1072 PRINTS Bacterial sensor protein C-terminal signature 580 598 IPR004358 GO:0016310|GO:0016772
Pvu7g2211 1072 ProSiteProfiles Histidine kinase domain profile. 355 622 IPR005467 -
Pvu7g2211 1072 SMART REC_2 946 1065 IPR001789 GO:0000160
Pvu7g2211 1072 Pfam Response regulator receiver domain 949 1065 IPR001789 GO:0000160
Pvu7g2211 1072 CDD REC_hyHK_CKI1_RcsC-like 948 1065 - -
Pvu7g2211 1072 PANTHER TWO-COMPONENT HISTIDINE KINASE 3 1066 - -
Pvu7g2211 1072 Gene3D - 416 627 IPR036890 -
Pvu7g2211 1072 PANTHER HISTIDINE KINASE CKI1-LIKE 3 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2211 Pvu-Chr7 45396955 45401973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2211 10 1071 Histidine Kinase Gene Family AT2G47430 39.909 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu7g2211 HATPase_c 3.4e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2211 - - var:108325233 1630.92