Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2200 ATGCTTTCTTCCTCCTTTGATCGACTCCACACACCATCGATGGTCTCCAAACCTACCGACTCCGCTTCCAAACCTCGAAAACAACTTGGAGAGCCAGCAAATGATGCATTGGGAACCTTGTCGCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATAGTATACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATGTCATACTTCAGGAGTCCTATCGGCAATGTCAACAAGGGGTTCTTCACAGACAGAGGGAGATAGGAAAACTCCAATTCTTTCTAGAATTGACCGTCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGTTGACAAAGACCACAGCAATCAAGATGTATTATCTGCTACAAGTATCAAAATACCATATATTGAAAGATTACCGCCATATACCTCTTGGATATTTCTTGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGACGAATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGCGAGGAAGAGTCAACAGAACATGAGGAGGAAAAACATGAATTTTCTGAGGCTGAAGATCGTGTTCTGTGGATGGCATTTGAGGAATATGGGTTAAACGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGAACCAGTTCAGAAATTCAGGAGAGGTACAAAAGTATCAAGGAAAAGAACATTGGTAGGTTGGATCAGCCTTCGGAAAACTCAGGAGATTGTGAATCTATTATTGGCATCTCTCCAGAGAAAAGCCTGAATGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAGTATATCCTAGTGAAAAGCAGACATTATGGTCTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTCAGTTACAGGAAGTCAAAGGTGTGTCAGAAGATACAACTTCTGCGTCTGATCATAATAAGAGAACTACAACTATTGAAGAGGCAGATGGGATATTGGCACCCTCCACTATAGAGGAACCTGTGGAAAAACGGAAAGTCACAAATCTGTCAGACACAGCACTTTGTGACTCAATACTCCCTCCCGATGGTTCTCAAAATTCTAATAAAAAGCTGAAGACAATCTCAGATGATGTAATTACTGTAAATAGTGATTCTAGCAATAACCTTTTGGGTGCATGTGATGACAGTAAACATACTATTACTTGTGCAATTTTGGACAAATCTTTAAAACATAATTCAAATAAATTAATAGACTCTTCTAGCACTTGTCATACGGATGAGCAGGACAAAAGTATTGGGGATGGACCCAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAGTTCAATGGAAGGGAAAGTTGATGGGATGCCAGGTCTCTCAGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGCTGCCTCATAGCAAGGAACTTACTTTCTGGCTTAAAGACTTGCGTGGAAATAACTAGTTACATGCATGCCGGAGGAGTGTCAATGCCTCACGGATCTATTGTTGCACCTAGTTCAATCATGGATGACAAGGGAAAATTTGATGCAGAGTACACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGAAAAAGGGGCAAAACAAGGAAGTTAAAATATTCTTGGAAGTCTACTGGCCACCCGTCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACATGCTGTGAAAAATATTGCGGTTGTTCAAAAAGCTGCAAGAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGCCCATGTTTTGCTGCAGGACGGGAATGTGACCCAGATGTGTGTCGGAATTGCTGGGTTAGTTGTGGTGATGGTTCATTAGGGGAGCCACCCCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTGAAGAACCCTGTTAACAAAAATGATTACCTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGACCGAGCCAACTCTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATTGATGCTAGCGAGGAGCTCTTCTATGATTATCGTTATGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGGTTCCAAGAGCGACGAATCAACAGTTTATCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA 2562 0.42 MLSSSFDRLHTPSMVSKPTDSASKPRKQLGEPANDALGTLSLKINQLKKQIQAERIVYIKEKIQSNEKKLQCHTSGVLSAMSTRGSSQTEGDRKTPILSRIDRPLCKFSGFSPVSVDKDHSNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEHEEEKHEFSEAEDRVLWMAFEEYGLNEEVLNIVSEFVGGTSSEIQERYKSIKEKNIGRLDQPSENSGDCESIIGISPEKSLNAALDSFDNLFCRRCLIFDCRLHGCSQPLVYPSEKQTLWSDPEGDKKPCSDQCYLQLQEVKGVSEDTTSASDHNKRTTTIEEADGILAPSTIEEPVEKRKVTNLSDTALCDSILPPDGSQNSNKKLKTISDDVITVNSDSSNNLLGACDDSKHTITCAILDKSLKHNSNKLIDSSSTCHTDEQDKSIGDGPKDPTNKTEFKKLSSSMEGKVDGMPGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCVEITSYMHAGGVSMPHGSIVAPSSIMDDKGKFDAEYTDQEMPSRSRLLRKRGKTRKLKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKSDESTVYQGRAKKHQSH* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2200 853 Pfam CXC domain 643 674 IPR041355 -
Pvu7g2200 853 MobiDBLite consensus disorder prediction 332 352 - -
Pvu7g2200 853 MobiDBLite consensus disorder prediction 334 348 - -
Pvu7g2200 853 Pfam SET domain 715 818 IPR001214 GO:0005515
Pvu7g2200 853 SMART CXC_2 639 676 IPR033467 -
Pvu7g2200 853 SMART sant 484 534 IPR001005 -
Pvu7g2200 853 SMART sant 191 241 IPR001005 -
Pvu7g2200 853 ProSiteProfiles SET domain profile. 704 819 IPR001214 GO:0005515
Pvu7g2200 853 MobiDBLite consensus disorder prediction 832 846 - -
Pvu7g2200 853 MobiDBLite consensus disorder prediction 1 23 - -
Pvu7g2200 853 Gene3D SET domain 605 821 IPR046341 -
Pvu7g2200 853 MobiDBLite consensus disorder prediction 445 474 - -
Pvu7g2200 853 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 13 853 IPR025778 GO:0031519
Pvu7g2200 853 MobiDBLite consensus disorder prediction 442 484 - -
Pvu7g2200 853 SUPERFAMILY SET domain 605 822 IPR046341 -
Pvu7g2200 853 SMART set_7 704 825 IPR001214 GO:0005515
Pvu7g2200 853 ProSiteProfiles CXC domain profile. 591 690 IPR026489 -
Pvu7g2200 853 CDD SET_EZH 704 820 - -
Pvu7g2200 853 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 28 851 - -
Pvu7g2200 853 MobiDBLite consensus disorder prediction 825 853 - -
Pvu7g2200 853 Coils Coil 181 201 - -
Pvu7g2200 853 MobiDBLite consensus disorder prediction 1 34 - -
Pvu7g2200 853 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 28 851 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2200 Pvu-Chr7 45288733 45299933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2200 693 822 C2H2 Transcription Factor Family AT2G23740 26.531 2.88e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu7g2200 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2200 - K11430 pvu:PHAVU_007G213900g 1722.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2200 7 45288733 45299933 Pvu7g2200 7 45288733 45299933 ECH
Pvu1g2207 1 47661603 47670038 Pvu7g2200 7 45288733 45299933 PCT