Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2190 ATGGAGAAGAAGGAGATGGTTGTGAAGACTGAGGATGCGGTTGGGTCCTCTTCCATTCCTTGTTATAATTCAAACGTTTATCCATTCTCGAACGCCTTTGATTTCTCTGAGGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGATTATAGTCCTCTGCTTGAGTTACCTCAACTTTCAACAGTTTCTGTGCCTCATCACTCTACAGTTAAGGTTCCATCTGATAACGGGAAAGAGTCTTCCGAGGTGTTGAACCACCAACCCGCCACTCCAAACTCTTCTTCTATTTCATCTGCATCCAGTGATGCTGTCAATGATGAACAGAAGATGACTCTAGACCAAGTTGAAGAAGATGACGATGAAGAAGAAGAAGAAGAAGGACAACAGAAGACTAAGAAACAGTTGAAGCCAAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGCGTGGTAGTCACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGCTCAGGTGTCTCCGCTGGATACGCCACCAACTTGGCTTCAGTTTTTCCACAAGCAGGAAACTACTTATCACAGTATCAGCAGCAGCACCACCACCAGCAACTTATTTTTAGCACATTGTCCTCTTTGGGTTTCCCTTACAATGACTCTTCCTCTCCAAAGAACGCTGGTTTTACTCAAGAGAGACGGCTTTGTAATCCGGGGACGAACGCATTTCTAAGGGATCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 960 0.4521 MEKKEMVVKTEDAVGSSSIPCYNSNVYPFSNAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVPHHSTVKVPSDNGKESSEVLNHQPATPNSSSISSASSDAVNDEQKMTLDQVEEDDDEEEEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVSAGYATNLASVFPQAGNYLSQYQQQHHHQQLIFSTLSSLGFPYNDSSSPKNAGFTQERRLCNPGTNAFLRDHGLLQDVVPSHMLKEE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2190 319 MobiDBLite consensus disorder prediction 71 153 - -
Pvu7g2190 319 SMART WRKY_cls 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g2190 319 MobiDBLite consensus disorder prediction 71 112 - -
Pvu7g2190 319 SUPERFAMILY WRKY DNA-binding domain 157 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g2190 319 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g2190 319 PANTHER WRKY TRANSCRIPTION FACTOR 1 311 - -
Pvu7g2190 319 PIRSF WRKY_txn_fact_IIc 1 319 IPR017396 GO:0003700
Pvu7g2190 319 ProSiteProfiles WRKY domain profile. 160 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g2190 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 311 IPR044810 GO:0003700
Pvu7g2190 319 Gene3D WRKY domain 150 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g2190 319 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2190 Pvu-Chr7 45186238 45188369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2190 34 319 WRKY Transcription Factor Family AT2G47260 48.624 3.64e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu7g2190 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2190 - - gmx:732591 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2190 7 45186238 45188369 Pvu7g2190 7 45186238 45188369 ECH
Pvu1g2218 1 47770993 47773054 Pvu7g2190 7 45186238 45188369 PCT