Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2180 ATGGTTTCCAAAACCCACTTCCAACTCATTGTTCTACTTGTTTTTCTTCTTTCTTCGTTAAACATTACTTCCAGCTCCTACGCACAGAGTGTGGCCAATTTTGACAAGTGGGTATCTTGCAACATGAAGAAGTATGATGAGAGAAAGAACATTTTGAAAAGCAAATGGAAGGTGGCTGATTTGAAGCTGAGGCAGGCTGAGAGTAACAAAGTTATAATAACAGTTAGCCAAGACGGTTCTGCTGACTTCAAGACCATTTCAGAAGCTCTCAATAGCATTCCACCACGTAACACTATGAGAGTTATAGTCTCCATTTCGCCGGGTGTTTATAGGGAGAAGGTGATGATCCCAAGAACAATGCCTTTTATTACATTGTCAGGGGAGGCTGGGAATCCACCAACTATTACTGGAAATGATACAGCATCTGCCTCCAAAAGAAATGGCACTCCCTTGGGGACGTTCCATAGTGCAACTGTTGCTGTGGATGCTAGCTACTTTGTGGCCATCAACATCAAATTTGAGAACAGTGCTCCACATGAGATTGGAAGGAGGGGAGAACAAGGCGTGGCGCTTCGGATCTCAGGAACCAAAGCTGCTTTTTACAATTGCAGTTTCAATGGAGCTCAAGACACTCTCTATGATCACAAAGGCCTTCACTTCTTCCACAACTGCTCTATTCAAGGTTCTGTGGATTTCATCTTTGGTTATGCCAGGTCCCTTTACCAGAATTGCTATCTAAATTCCACAACTAAGAAGGTGGCTTCCATCACTGCTCAAAAGCGTACAAATTCGTCACTGGACAGTGGATTCTCCTTCCAAAACTGCACAGTAACTGGTAGTGGGAAGGTTTATCTGGGAAGAGCATGGGGAGATTATTCCAGAGTTGTTTTCTCTTACACCTACATGGACAACCTAGTACTCCCCAAAGGATGGAGTGATTGGGGTGACCAAAAGCGTGATTCGAGGGTATATTATGGAGAATACATGTGTAGTGGACCAGGAGCTAACATGGCTGGAAGAGTGCCATGGGCACGGGTGCTCACGGATGAAGAGGCCAAGCCTTTTATTGGGACCCAATTCATTGAAGGGGACACTTGGCTCATTAGCCCCTAA 1113 0.4474 MVSKTHFQLIVLLVFLLSSLNITSSSYAQSVANFDKWVSCNMKKYDERKNILKSKWKVADLKLRQAESNKVIITVSQDGSADFKTISEALNSIPPRNTMRVIVSISPGVYREKVMIPRTMPFITLSGEAGNPPTITGNDTASASKRNGTPLGTFHSATVAVDASYFVAINIKFENSAPHEIGRRGEQGVALRISGTKAAFYNCSFNGAQDTLYDHKGLHFFHNCSIQGSVDFIFGYARSLYQNCYLNSTTKKVASITAQKRTNSSLDSGFSFQNCTVTGSGKVYLGRAWGDYSRVVFSYTYMDNLVLPKGWSDWGDQKRDSRVYYGEYMCSGPGANMAGRVPWARVLTDEEAKPFIGTQFIEGDTWLISP* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2180 370 SUPERFAMILY Pectin lyase-like 71 367 IPR011050 -
Pvu7g2180 370 Pfam Pectinesterase 73 364 IPR000070 GO:0030599|GO:0042545
Pvu7g2180 370 Gene3D - 67 369 IPR012334 -
Pvu7g2180 370 PANTHER PECTINESTERASE 16 368 - -
Pvu7g2180 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 368 - -
Pvu7g2180 370 ProSitePatterns Pectinesterase signature 2. 226 235 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2180 Pvu-Chr7 45075831 45081093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2180 68 367 Carbohydrate Esterase AT5G47500 46.358 1.57e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2180 K01051 - cit:102614801 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2180 7 45075831 45081093 Pvu7g2180 7 45075831 45081093 ECH
Pvu1g1897 1 44781655 44786519 Pvu7g2180 7 45075831 45081093 PCT