Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2166 ATGGAGGCTAGATTTGGTGCGGAAGCTTATCATCTTTTTGGTGTGGGTGCTTCCTCGGATTTGAGGGGTGTGGGGAAGAGGTCCTCGGAGTGGGATTTGAATGATTGGAGATGGGATGGCGATCTGTTCATCGCAAGCCGGTTGAATCCAGTGCCAGCGGATGGTGTGGGAGTGGGACAGCAATTTTTCCCTCTAGGGTCTGGGATCCCGGTGGCCGGAGGTCCCTCCAACAGTTCTTCATGCTCTGAGGAAGTAGATCCTAGGGATCCCATGGGGAGCAAGGAAGGGGACAAGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGAGGAAACGGGTACTCTTAGTTTAAAGCTTGGTGGGCATGCTTCTGCAGTGGTGGATAGGGAAGTTGCGAGCTGGGATGGTATGAATGGGAAGAAGAGTAGAGTATCTGGAAGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGCAGTGCTGATCTAAGCAAAGCTAAGGATTATCACAGACGACATAAAGTTTGTGAGATGCACTCCAAGGCCAGTAGGGCACTTGTCGGAAATGCAATGCAGAGATTCTGTCAACAATGTAGCAGGTTTCACATGCTTCAAGAGTTTGATGAGGGAAAGAGAAGCTGCAGAAGACGCTTGGCAGGACATAATAAACGAAGAAGGAAAACGAATCATGAACCTGTTCCTAATGGAAGTTCATTAAATGATGATCAGACTAGTAGCTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGACTACAGATCAGGATCTACTAACTCATATTCTGAGGAGTCTTGCTAGTCAGAATGGCGAGCAAGGGGGTAAGAACATTTCTAACCTTTTGCGAGAACCAGAGAATTTGTTGATAGAAGGCGATTCATCAAGGAAGTCAGAGATGGTGTCAACTTTATTCTCCAATGGTTCTCAAGGTTCTCCAACTGTTACAAGACAGCATGAAGCTGTGTCCATGGCTAAACTGCAGCAACAAGTTATGCATGCACATGATGCTAGGGCCTCTGAACAGCAAATTACATCTTCTATAAAGCCCAGCATGTCAAACAGTCCTCCGGCATACTCAGAAGCCAGAGACAGTACTTCTGGACAGATCAAGATGAATAATTTTGATTTAAATGACATATATATTGACTCAGATGATGGTATGGAAGATCTAGAAAGATTGCCTGTCTCAGCAAATCTTGTTACTAGCTCTCTTGATTACCCATGGGCACAACAAGATTCTCATCACTCAAGTCCACCTCAAACAAGTGGAAATTCTGATTCGGCTTCTGCCCAGTCTCCTTCTAGTTCCAGTGGAGAAGCTCAGAGTCGTACAGATCGAATTGTTTTTAAGCTCTTTGGTAAAGAGCCCAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGTTATCTCACAGTCCTACTGATATGGAGAGCTACATTCGGCCTGGTTGTATTGTTTTGACCATTTATCTACGTCAGGCTGAGGCTTTGTGGGAGGAACTTTGCTATGATCTGACTTCCAGTTTGAATAGGCTGTTGGATGTCTCAGATGACACTTTTTGGAGAAATGGATGGGTTCACATCAGGGTGCAGCACCAGATGGCCTTCATTTTTAATGGTCAAGTTGTCATAGATACCTCCTTACCCTTCAGAAGTAACAACTATAGCAAGATTTTGACTGTTAGTCCAATTGCTGTACCAGCATCAAAGAGAGCTCAGTTTTCTGTTAAGGGTGTCAACCTTATGTGCCCTGCCACTAGGTTAATGTGTGCTGTAGAAGGGAAATATGTGGTCTGTGAAGATGCTCATATGTCAATGGATCAGTGTGCCAAAGAGCCTGATGAACTTCAGTGCATCCAGTTTTCATGTTCTGTCCCTGTGATGAATGGACGAGGATTTATTGAGATTGAGGACCAGAGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGTGGAGGAGGAGGATGTTTGCTCAGAAATCTGTACACTTGAGCCTCTTCTAGAAATAAGTGAAACTGACCCAGATATTGAAGGGACTGGAAAAGTTAAAGCCAAAAATCAAGCCATGGATTTTATTCATGAAATGGGCTGGCTTCTTCACAGAAGCCAGTTGAAATTAAGGATGGTTCACTTGAACTCTAGCGTTGAACTCTATCCACTGAAACGGTTTAAGTGGCTTATGGAGTTTTCCATGGATCATGATTGGTGTGCAGCAGTGAAAAAACTTCTAAATCTACTGCTTGATGGAACTGTAAATATAGGAGATCACCCTTCCCTGTATCTTGCACTTTCAGAGATGGGTCTCCTTCACAAAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGTTGCTTTTGGGATATGTTCCTGAGAATGTTTCAGATGAACTAGAACCTGAAGTCAAGGCTCTAGTTGATGGAGAGAACAAGACCTTCTTGTTTAGACCTGATGTTGTTGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCTGGGAAAGATGGTTCCGAGGATGTGCTCGATGCTTTAACTAATGATCCTTGCATGGTTGGAATTGAAGCATGGAAAAATGCTCGTGACAGCACAGGCTCTACACCTGAGGATTATGCACGTTTACGTGGTCATTATGCTTACATTCACTTGGTGCAGAAGAAAATTAACAAGAGACATGGAGCAGCTCATGTGGTGGTTGAGATTCCAAGTAACACGACAGAGAGCAATACAAACCAGAAGCAGAATGAGGCATCCTCTAGCTTTGAGATTGGAAAGCCTGCAGTAAGGCTTAGCCAAAGGCCTTGTAAACTCTGTGACAGTAAAATGTTCTGCAGAACCGCAGTAGGGAAGTCTATGGTATACAGACCTGCAATGCTCTCAATGGTAGCCATAGCTGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAGAGCTCTCCCGAAGTAATATGTATGTTCCGACCCTTCAGATGGGAAACGTTGGACTTTGGAACAAGCTAA 3045 0.4397 MEARFGAEAYHLFGVGASSDLRGVGKRSSEWDLNDWRWDGDLFIASRLNPVPADGVGVGQQFFPLGSGIPVAGGPSNSSSCSEEVDPRDPMGSKEGDKKRRVIVLEDDGLNEETGTLSLKLGGHASAVVDREVASWDGMNGKKSRVSGSTSNRAVCQVEDCSADLSKAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEPVPNGSSLNDDQTSSYLLISLLKILSNMHSDRSDQTTDQDLLTHILRSLASQNGEQGGKNISNLLREPENLLIEGDSSRKSEMVSTLFSNGSQGSPTVTRQHEAVSMAKLQQQVMHAHDARASEQQITSSIKPSMSNSPPAYSEARDSTSGQIKMNNFDLNDIYIDSDDGMEDLERLPVSANLVTSSLDYPWAQQDSHHSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDMESYIRPGCIVLTIYLRQAEALWEELCYDLTSSLNRLLDVSDDTFWRNGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRAQFSVKGVNLMCPATRLMCAVEGKYVVCEDAHMSMDQCAKEPDELQCIQFSCSVPVMNGRGFIEIEDQSLSSSFFPFIVVEEEDVCSEICTLEPLLEISETDPDIEGTGKVKAKNQAMDFIHEMGWLLHRSQLKLRMVHLNSSVELYPLKRFKWLMEFSMDHDWCAAVKKLLNLLLDGTVNIGDHPSLYLALSEMGLLHKAVRRNSKQLVELLLGYVPENVSDELEPEVKALVDGENKTFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYAYIHLVQKKINKRHGAAHVVVEIPSNTTESNTNQKQNEASSSFEIGKPAVRLSQRPCKLCDSKMFCRTAVGKSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWETLDFGTS* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2166 1014 MobiDBLite consensus disorder prediction 348 383 - -
Pvu7g2166 1014 MobiDBLite consensus disorder prediction 426 459 - -
Pvu7g2166 1014 MobiDBLite consensus disorder prediction 351 383 - -
Pvu7g2166 1014 ProSiteProfiles Zinc finger SBP-type profile. 153 230 IPR004333 GO:0003677
Pvu7g2166 1014 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 17 1013 - -
Pvu7g2166 1014 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 17 1013 IPR044817 GO:0003677
Pvu7g2166 1014 SUPERFAMILY Ankyrin repeat 781 900 IPR036770 -
Pvu7g2166 1014 MobiDBLite consensus disorder prediction 220 244 - -
Pvu7g2166 1014 SUPERFAMILY SBT domain 154 234 IPR036893 GO:0003677|GO:0005634
Pvu7g2166 1014 MobiDBLite consensus disorder prediction 73 99 - -
Pvu7g2166 1014 Pfam SBP domain 156 229 IPR004333 GO:0003677
Pvu7g2166 1014 Gene3D - 757 914 IPR036770 -
Pvu7g2166 1014 Gene3D - 146 217 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2166 Pvu-Chr7 44910414 44917769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2166 1 1014 SBP-box Gene Family AT3G60030 53.883 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pvu7g2166 SBP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2166 - - gmx:100814273 1863.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2166 7 44910414 44917769 Pvu7g2166 7 44910414 44917769 ECH