Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2164 ATGAACTCAAAAGTAGTTATCTCTGGTGTTTCCCTCATCCTCGTGGTGGGTGTTGCCATCGGTGTTGTGGTTGTGGTTAACAAAAAGGACTCAGATCCTCAAATAGCTGCTCAACAAAAGAGAATGAAGGTAATGTGCGAAGGCACCGAAGACCCTCAGCTTTGTCACGAAACTCTCAGCACTGTGAAAGGTAACACCTCAGACCCAAAGGTTTACATAGCAGCAGGAGTGGAAGCAACGATGAAAAGTGTGATCCAAGCTTTGAACATGAGTGACAAGCTGAAAGTGGAGCATGGAGACAAAGACCCTGGCATAAAAATGGCCCTGGATGATTGCAAAGACTTGATCCAATACGCGTTGGACAGCATCGAGTCCTCGGTTAACTTGGTTAACAGCCAGAACATTCAAGCCATGTACGACCAATCCCCAGACTTCAGAAACTGGTTGAGTGCTATAATCTCGTACCAGGAGTCATGCACGGATGGGTTGAACAACGAGACAAACGGTGAGAAAGAAATTAAGGAAAAATTGAACACAGGTAGTTTGGACGAAATGGGGAAGCTCACGGGCATAGTCCTTGACATTGTGACAAACCTGTCCACAGTCCTTGAGAGTTTTGACTTGAAGTTGAATCTGAACCCTTCTTCTCGGCGTCTTCTTCAGGTGGATAGTGAAGGATTACCTACGTGGTTCTCTGGTGCAGATCGGAAGCTCCTTGCTCAAGTGCAAAAAGGGGCAGCAGCCGCACCAAACGCAGTGGTTGCCAAGGATGGTAGTGGTAAATTCAAAAGCATTAAGGAAGCTATTGACGCCTACCCTGCAAATCTCCAAGGCAGATATGTGATTTACGTTAAGACTGGGGTCTATGACGAGTCCATCTTAATTCCTAAGAAGTCAGCCAATATTCTCATTTATGGTGATGGCCCTGGTAAGACCGTTGTCACTGGTCGCAAGAACTTTGTAGATGGCGTCAAGACAATGCAAACTGCTACCTTCGCCAACACTGCACCAGGATTCATCGCCAAGTCAATGACATTCGAGAACACCGCTGGTGCCGCCAAGCACCAGGCAGTGGCATTCAGAAACCAGGGAGACATGTCAGCAATCTTTGACTGCGCATTTCACGGTTACCAAGACACACTGTACGTTCACGCGAACCGTCAATTCTACCGCAACTGCGAAATCTCTGGAACAATCGACTTCATCTTCGGAGCATCTGCTACTGTGATCCAGAACTCCAAAATCATCGGAAGGTTGCCAATGGCTAACCAGTTCAACACAGTGACCGCTGACGGAACGAAGCTGAAGAACATGGCTACAGGGATCGTGCTCCAGAACTGCGAGATAGTGCCAGAGCAGGCTCTTTTCCCTTCTAGGCTTAAAACTAAATCGTACTTGGGGAGGCCATGGAAGCAATTTGCAAGAACTATTGTCATGGAATCTACCATAGGTGACTTTATTACAGCAGAAGGGTGGAATGTTTGGGATGGGAACTTGTATCTTGACACCTTGTACTATGCTGAGTACGCTAACACTGGAGCTGGTTCCAACATTCAAGGTAGGGTAAAGTGGAAGGGCTACCGTGGAAATATTAATAAGAACGAGGCCACACAATTCACTCCTGGCCAATTCCTCAGAGGTGGAACTGATGATTGGTTGAAGGCTTCTGGTGTTCCTTACGCCGTTGGATTCATGAAAGCTTGA 1704 0.4701 MNSKVVISGVSLILVVGVAIGVVVVVNKKDSDPQIAAQQKRMKVMCEGTEDPQLCHETLSTVKGNTSDPKVYIAAGVEATMKSVIQALNMSDKLKVEHGDKDPGIKMALDDCKDLIQYALDSIESSVNLVNSQNIQAMYDQSPDFRNWLSAIISYQESCTDGLNNETNGEKEIKEKLNTGSLDEMGKLTGIVLDIVTNLSTVLESFDLKLNLNPSSRRLLQVDSEGLPTWFSGADRKLLAQVQKGAAAAPNAVVAKDGSGKFKSIKEAIDAYPANLQGRYVIYVKTGVYDESILIPKKSANILIYGDGPGKTVVTGRKNFVDGVKTMQTATFANTAPGFIAKSMTFENTAGAAKHQAVAFRNQGDMSAIFDCAFHGYQDTLYVHANRQFYRNCEISGTIDFIFGASATVIQNSKIIGRLPMANQFNTVTADGTKLKNMATGIVLQNCEIVPEQALFPSRLKTKSYLGRPWKQFARTIVMESTIGDFITAEGWNVWDGNLYLDTLYYAEYANTGAGSNIQGRVKWKGYRGNINKNEATQFTPGQFLRGGTDDWLKASGVPYAVGFMKA* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2164 567 Gene3D - 245 564 IPR012334 -
Pvu7g2164 567 PANTHER PECTINESTERASE 3 565 - -
Pvu7g2164 567 SUPERFAMILY Pectin lyase-like 246 562 IPR011050 -
Pvu7g2164 567 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Pvu7g2164 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 199 IPR035513 -
Pvu7g2164 567 TIGRFAM PME_inhib: pectinesterase inhibitor domain 19 199 IPR006501 GO:0004857
Pvu7g2164 567 CDD PMEI-like_3 45 201 - -
Pvu7g2164 567 Pfam Plant invertase/pectin methylesterase inhibitor 43 195 IPR006501 GO:0004857
Pvu7g2164 567 SMART PMEI_2 37 195 IPR006501 GO:0004857
Pvu7g2164 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 200 IPR035513 -
Pvu7g2164 567 Pfam Pectinesterase 251 547 IPR000070 GO:0030599|GO:0042545
Pvu7g2164 567 PANTHER PECTINESTERASE 3 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2164 Pvu-Chr7 44890351 44892633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2164 5 565 Carbohydrate Esterase AT3G05610 39.753 1.04e-137 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2164 K01051 - gmx:100789650 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2248 1 48031828 48033546 Pvu7g2164 7 44890351 44892633 PCT