Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2162 ATGCAGGCAAAAATACTCGGTTCCGCCGTTTCGCTCATCCTTGTGGTGGGTGTGGTGATTGGTGTGGTTGCTGTGGTTCAAAGCCCGAAGGCCCAGACCAACAGTACAGGAGACCTAAAAACCACGAACAGAGCTGTGACAACGTTGTGCCAAGGCTCAGATGACGAAAAGCTGTGTCACAATGTGCTTTCCACCTCAAACAGCTCAGACCCGAAGGATTACATTGTCACCGTGGTGAAATCCTCGATGGACAGTGTGATCAAAGCTTTCAACATGAGCGACAAGCTCACAGTGGAGCATGGCAACAGCAGCGAAGGAATGAAGATGGCTCTCGACGATTGCAAGGATTTGTTGCAATCCGCGATGCACGATCTTGAGGCCTCAGGTGTGATGGTCAAAGAGAGCAGCATCGAGGACGTTAACGATCGCACTGCCGAACTCAAGAACTGGTTAGGTGCTGTTGTGGCCTACCAGCTATCTTGCCTCGATGGCTTCAACACCGACGGCGAGAAGAAGGTTCAGGAACAGTTGCAGGCCGATAGCTTGGACAGCGTTGGAAAGCTCACTGGATTGGCACTCGATGTCGTGTCGGGGATTTCAAAGATTCTTCAATCCTTGGACTTGAACTTGGCTTTGAAACCCTCCACTCGTCGCCTTCTTGAGCTTGATCAAGACGGGTACCCCACTTGGCTCTCCGCTGCTGACCGAAGGCTCTTGGCTCAAGGAGCTGTTCCCCATGCTACAGTGGCTAAGGATGGCAGCGGCCAATTCAAAACCATTACGGACGCCATCAACTCCTACCCCAAGAATCACCAAGGAAGATTTATCGTCTACGTCAAGGCCGGTGTCTATGACGAGTACATCCTTGTTGACAAGAACAAGGTGAATCTTCTCATCTATGGCGATGGCCCCACCAAGACCATCATCACCGGACGCAAAAACTTTGCCGAGGGTACCAAGACAATGAGAACCTCTACCTTCTCCACGGTTGCTGATGATTTCATGGCAAAGTCAATTGCATTCGAGAACACCGCCGGAGCAAAAGGACACCAAGCAGTGGCTCTTCGCGTGCAGGGTGATCGTTCAGTCTTCTTCGATTGCGCAATGCGCGGTTACCAAGACACATTGTACGCACACGCCCACCGTCAGTTCTACCGCAACTGTGAAATCTCTGGCACAATCGACTTCATCTTCGGATACGCCACCACCTTGATCCAGAACTCCAAGATCTTCGTGAGGAAGCCCGAAGCAAACCAACAGAACATAGTAGTGGCAGATGGAACAGGACAGAAGAACATGCCTACAGGCGTTGTCCTCCAGAACTGTGAGATCATGCCCGACCCTTCACTCGCCGCTGATCGCTTGACAGTGAAGACATACCTTGCCAGGCCATGGAAGGCATTCTCCAGGGCAATTTTCATCGAGAATGTGATCGGTGACTTGATCCAGCCAGAGGGCTACATTCCATGGAACCCTACTGTTGAGCCCAACACCAAAGACTGTTTCTTCGGTGAGTTTGGCAACAGTGGACCTGGTTCAAATGCTAACGCAAGGGCACCCTTTAGCAAAGGTGTGATCAGCAAGCAAGAGGCTGCCAAGTACACTGCTGAGGCCTGGCTCCAAGCTAGTGCCTGGTTGCCCGCCACTGGCATTCCCTTCGACGCTGGCTTCGTCAAAGCCTAA 1683 0.5187 MQAKILGSAVSLILVVGVVIGVVAVVQSPKAQTNSTGDLKTTNRAVTTLCQGSDDEKLCHNVLSTSNSSDPKDYIVTVVKSSMDSVIKAFNMSDKLTVEHGNSSEGMKMALDDCKDLLQSAMHDLEASGVMVKESSIEDVNDRTAELKNWLGAVVAYQLSCLDGFNTDGEKKVQEQLQADSLDSVGKLTGLALDVVSGISKILQSLDLNLALKPSTRRLLELDQDGYPTWLSAADRRLLAQGAVPHATVAKDGSGQFKTITDAINSYPKNHQGRFIVYVKAGVYDEYILVDKNKVNLLIYGDGPTKTIITGRKNFAEGTKTMRTSTFSTVADDFMAKSIAFENTAGAKGHQAVALRVQGDRSVFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYATTLIQNSKIFVRKPEANQQNIVVADGTGQKNMPTGVVLQNCEIMPDPSLAADRLTVKTYLARPWKAFSRAIFIENVIGDLIQPEGYIPWNPTVEPNTKDCFFGEFGNSGPGSNANARAPFSKGVISKQEAAKYTAEAWLQASAWLPATGIPFDAGFVKA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2162 560 Gene3D - 243 559 IPR012334 -
Pvu7g2162 560 TIGRFAM PME_inhib: pectinesterase inhibitor domain 18 177 IPR006501 GO:0004857
Pvu7g2162 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Pvu7g2162 560 SUPERFAMILY Pectin lyase-like 246 555 IPR011050 -
Pvu7g2162 560 PANTHER PECTINESTERASE 4 557 - -
Pvu7g2162 560 CDD PMEI-like_3 48 201 - -
Pvu7g2162 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Pvu7g2162 560 SMART PMEI_2 41 195 IPR006501 GO:0004857
Pvu7g2162 560 ProSitePatterns Pectinesterase signature 2. 390 399 IPR033131 -
Pvu7g2162 560 PANTHER PECTINESTERASE 4 557 - -
Pvu7g2162 560 Pfam Pectinesterase 247 542 IPR000070 GO:0030599|GO:0042545
Pvu7g2162 560 Pfam Plant invertase/pectin methylesterase inhibitor 45 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2162 Pvu-Chr7 44879051 44881155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2162 1 557 Carbohydrate Esterase AT2G47030 38.640 8.91e-130 390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2162 7 44879051 44881155 Pvu7g2162 7 44879051 44881155 ECH
Pvu7g2162 7 44879051 44881155 Pvu1g2249 1 48037819 48039537 PCT