Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2156 ATGAAGAACAAACACAACATTAAAGTTGAGTTGAGAGAAGCATTTGATTTTTCAGAGGTGTCATGTTGGACGGTGACGGGGGAGAGGCAGACTACACGAATAAGGGGACTCTATCTGAAAACTGTTCTGAGACAAGATATTGCTTTCTTTGATGAGGAAACAAACACCGGAGAGGTCATAGGGAGAATCTCAGGTGACACCATTCTCTTACAAGATGCCATGGGTGAGAAGGTTGGGAGATTTCTGCAGCTTATAGCAACATGCACTGGCGGATTTGTGATAGCGTCTGTGAAAGGGTGGCTTCTCACTGTTGTCATGTTGTCCACTTTTCCGCTTCTTGTTTTGTCAGGTGCTGCTATGGCCTTCACCATAGAAAGGTTTGCTTCTAGAGGTCAAACGGATTATGCAAAAGCTGCACGTGTAGTTGAACAGACAATTGGCTCAATAAGAACCGTTGCAGCCTTTACTGGGGAAAAACAAGCAGTATCTAGTTATAAAACAGATCTTGCACATGCTTACAAATCAGGAATTCAAGAAGGTTGCATTTATGGAGTCGGTACAGGCACACTTTTGTTTGTTACTTTGGGTACTTATGCTTTGGGTGTATGGTTTGGAGCAAAGTTGATAATGGAAAAAGGATATAGTGGGGGCACAGTGATGAATGTGATTTTTTCCATACTTATTGGCTCATCGTCTCTTGGACAGACATCCCCTTGCATAAATGCTTTTGCTTTAGGTCAGGCTGCAGCTCACAAAATGTTCCAGACAATTGAAAGGAAGCCACAGATAGACGCTTATGATCCAAATGGGAAAATATTAGAAGATATTGAAGGCGAAATAGAGTTAAGGGATGTTTATTTCAGTTACCCATCAAGACCAGAAGAACTGATATTTGATGGATTCTCTTTTCATATAAAAAGTGGCACAACTGCAGCGTTAGTTGGACAAAGTGGAAGTGGAAAGTCTACAGTTATCAGCTTGGTAGAAAGATTCTATGATCCACATGCTGGTGAAGTTCTTATTGATGGTATTAACCTGAAAGAATTTCAGCTAAGGTGGATCAGAGGAAAAATAGGCCTTGTCAGCCAAGAGCCGGTGTTGTTTTCATGTAGCATTGAGGACAATATTGCATATGGAAAAGAAGGTGCAACAATTGAAGAGATAAGATCTGCTGCTGAACTTGCAAATGCTGCTAAATTCATTGATAAGCTTCCACAGGGATTGAACACACTGGTTGGTGATTATGGAAGCAAGTTATCTGGTGGGCAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTGAAAAATCCTCGAATTCTACTTCTGGATGAAGCCACAAGTTCACTTGACGTAGAGTCAGAAAGAATAGTGCAAGAGGCTCTAAACAGGATCATGATCAACAGAACTACTATTGTGGTGGCGCATCGCTTGAGCACAGTGAAGAATGCTGATACGATAGCCATCATTCACAAAGGGAAAATGATTGAGAAAGGAACACACTCAGAATTATTAAAGGAAGATGGAGCTTACTCGCAACTTATACGCCTACAAGAAATAAACAATGATTCAGAAGAAAGTGCAGATCATCACAGCAAGAATGAAATTTCTGGAGAATCCTTTAGACAATCTAGTCAAAGGAGATCATTTCAAAGATCTATCAGTAGGGATTCATCCAAAGGGAACAGTAGCACCCACTCTTATTCTGTTTCCTTTGGTTTATCCAAAGGAGTTAACGTCCCTCATTCTGAACTTGAAAACTCACAACCCAAAGAACAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTCAATAAGCCAGAGATTCCTGTTCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTCTTGTAAATCCAATATATGGGTTGCTGATTTCCATGGCCATGAAGACATTTTATGAACCTTTTGATCAGATGCAAAAAGACTCCAAGTTTTGGGCACTGATGTTTATTACCGTTGGTTTTGCAGCATTTCTGACAAATGTTGGACAAGGATACTTCTTTTCTGTAGCAGGATTCAAGTTAATCCACCGTATCAGGCTAATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTGGTTGGTTTGATGAACCTGAAAACTCAAGTGGTGCCATCAGTGCCAGACTCTTTGCAGATGCGGCTTTGGTACGTGCCCTTGTTGGTGATGCGCTGGGACTATTAGTTCAAAATTCAGCATCTGCATTGGCAGGTTTGATCATTGCTTTCACTGCATCTTGGCAGATGACGTTAGTTATTCTTGTCCTGGTTCCCATTTTAGGATTCAATTTTTATGTTAAGATGAAACTCTTGAAGAAATTCACTGCAGATGTAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTGAGAAGCATAAGAACAGTTGCATCGTTCTGCGCTGAAGACAAGGTTATGGAAATGTACAGGAAAAAATGTGAGAACCCCATCAAAGCAGGAAGACAAGGAGGATTGATCAACGGATTAGCGTTTGCGCTTTCGCTTTTCACGTTGCTTAGTTTTCAAGCAACCGGTTTCTACGCAGGTGCTAGAGTTGTGGAAGCTGGGAAGGCGCCGTTCTCAGATGTTTTGCGGGTTTTCTTTGCATTAATTCTGGTAACTGCTGGTATCTCCCAGTCAACCTCCCTTGGTCCTGACTCAAGCAAAGCCAAGTCAGCCACTGCTTCCATATTTAGAATGCTTGATAAGAAGTCAAAAATAGATCCCAGTGATGAGTCTGGCATCACACTGGATAGCGTGAAGGGAGAAATTGAGCTTCGTCATGTGAGCTTCAAGTATCCATCTAGACCTGACATACCCATTTTCCAAGACCTCAGCTTGGCCATCCATTCTGGCAAGACGGTGGCTCTTGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGATAGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGGCAAATCACACTTGATGGTGTGGAAATTCGTGAGTTACAACTCAAGTGGTTCAGACAGCAGATGGGGATTGTAAGCCAAGAGCCAGTTTTGTTCAATGAAACAATACGTGCCAATATTGCCTATGGAAAAGAGGGAAATGCTACTGAAGCAGAAGTCATAGCTGCTACAGAATTGGCCAATGCACATACATACATTAGTGCCCTACAACAGGGTTATGATACTTTAGTGGGGGAGAGAGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCCATTGCACGAGCCATAATAAGAAGTCCAAAGATACTACTGCTTGATGAGGCGACGAGTGCCTTAGATGCGGAGTCAGAAAGAGTTGTTCAAGATGCATTAGAGAAAGTCATGGTGAACAGAACCACTGTGGTCGTGGCACATCGTCTATCCACAATAAAAAATGCAGATGTCATTGCTGTTGTCAAAAATGGAGTCATAGTGGAAAAAGGAAAACATGAAGAACTCATCAACGTCTGCGGTGGATTTTATGCTTCCTTACTCCAACTTCACACAAGTGCTTCCACACCTTGA 3540 0.4232 MKNKHNIKVELREAFDFSEVSCWTVTGERQTTRIRGLYLKTVLRQDIAFFDEETNTGEVIGRISGDTILLQDAMGEKVGRFLQLIATCTGGFVIASVKGWLLTVVMLSTFPLLVLSGAAMAFTIERFASRGQTDYAKAARVVEQTIGSIRTVAAFTGEKQAVSSYKTDLAHAYKSGIQEGCIYGVGTGTLLFVTLGTYALGVWFGAKLIMEKGYSGGTVMNVIFSILIGSSSLGQTSPCINAFALGQAAAHKMFQTIERKPQIDAYDPNGKILEDIEGEIELRDVYFSYPSRPEELIFDGFSFHIKSGTTAALVGQSGSGKSTVISLVERFYDPHAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFSCSIEDNIAYGKEGATIEEIRSAAELANAAKFIDKLPQGLNTLVGDYGSKLSGGQKQRIAIARAILKNPRILLLDEATSSLDVESERIVQEALNRIMINRTTIVVAHRLSTVKNADTIAIIHKGKMIEKGTHSELLKEDGAYSQLIRLQEINNDSEESADHHSKNEISGESFRQSSQRRSFQRSISRDSSKGNSSTHSYSVSFGLSKGVNVPHSELENSQPKEQAPEVPLSRLASLNKPEIPVLLIGCVAAIANGLVNPIYGLLISMAMKTFYEPFDQMQKDSKFWALMFITVGFAAFLTNVGQGYFFSVAGFKLIHRIRLMCFEKVVNMEVGWFDEPENSSGAISARLFADAALVRALVGDALGLLVQNSASALAGLIIAFTASWQMTLVILVLVPILGFNFYVKMKLLKKFTADVKMMYEEASQVANDAVRSIRTVASFCAEDKVMEMYRKKCENPIKAGRQGGLINGLAFALSLFTLLSFQATGFYAGARVVEAGKAPFSDVLRVFFALILVTAGISQSTSLGPDSSKAKSATASIFRMLDKKSKIDPSDESGITLDSVKGEIELRHVSFKYPSRPDIPIFQDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIRELQLKWFRQQMGIVSQEPVLFNETIRANIAYGKEGNATEAEVIAATELANAHTYISALQQGYDTLVGERGTQLSGGQKQRVAIARAIIRSPKILLLDEATSALDAESERVVQDALEKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEELINVCGGFYASLLQLHTSASTP* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2156 1179 Gene3D ABC transporter type 1, transmembrane domain 15 908 IPR036640 GO:0005524|GO:0016021
Pvu7g2156 1179 MobiDBLite consensus disorder prediction 537 567 - -
Pvu7g2156 1179 PANTHER - 17 1175 - -
Pvu7g2156 1179 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 14 245 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2156 1179 SUPERFAMILY ABC transporter transmembrane region 600 918 IPR036640 GO:0005524|GO:0016021
Pvu7g2156 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 517 IPR027417 -
Pvu7g2156 1179 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 17 1175 - -
Pvu7g2156 1179 MobiDBLite consensus disorder prediction 522 536 - -
Pvu7g2156 1179 Gene3D - 924 1177 IPR027417 -
Pvu7g2156 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 924 1171 IPR027417 -
Pvu7g2156 1179 Pfam ABC transporter 299 447 IPR003439 GO:0005524
Pvu7g2156 1179 Pfam ABC transporter 953 1102 IPR003439 GO:0005524
Pvu7g2156 1179 CDD ABC_MTABC3_MDL1_MDL2 934 1172 - -
Pvu7g2156 1179 CDD ABC_MTABC3_MDL1_MDL2 280 517 - -
Pvu7g2156 1179 Gene3D - 278 534 IPR027417 -
Pvu7g2156 1179 MobiDBLite consensus disorder prediction 522 567 - -
Pvu7g2156 1179 ProSitePatterns ABC transporters family signature. 1074 1088 IPR017871 GO:0005524
Pvu7g2156 1179 ProSitePatterns ABC transporters family signature. 419 433 IPR017871 GO:0005524
Pvu7g2156 1179 CDD ABC_6TM_Pgp_ABCB1_D2_like 602 917 - -
Pvu7g2156 1179 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 280 516 IPR003439 GO:0005524
Pvu7g2156 1179 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 613 899 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2156 1179 CDD ABC_6TM_Pgp_ABCB1_D1_like 14 253 - -
Pvu7g2156 1179 SUPERFAMILY ABC transporter transmembrane region 15 264 IPR036640 GO:0005524|GO:0016021
Pvu7g2156 1179 SMART AAA_5 961 1154 IPR003593 -
Pvu7g2156 1179 SMART AAA_5 307 507 IPR003593 -
Pvu7g2156 1179 Pfam ABC transporter transmembrane region 19 230 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2156 1179 Pfam ABC transporter transmembrane region 612 882 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2156 1179 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 934 1171 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2156 Pvu-Chr7 44841984 44848491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2156 14 1173 Calmodulin-binding Proteins AT2G36910 43.830 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2156 K05658 - gmx:100800034 1787.31