Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2155 ATGGGTGTGGAGAATGATGAAGAGAGGAAGCATGATGACACAAGCACGTCAGAGAATCGTGCAGGAACCAGCACGAATGGGGAAAGAGAAGAAAAAAGTAAACAGAAAGAAAAACCTGAGACAGTTCCATTTTTCAAGCTGTTCGCTTTCGCAGACTCCACTGACATTCTTTTGATGGTTGTTGGGACTATTGGTGCCATTGGAAATGGGATGGGTTTGCCTATTATGACGTTGCTGTTTGGTGAAATGATTGATAGCTTCGGTAGTAACCAGCAAAATCCTAACGTGGTGGAAGCAGTGTCCAAGGTTTCTCTAAAATTTGTGTACTTGGCAGTGGGATCTGGGATGGCAGCGTTTCTCCAGGTGACTAGCTGGATGGTCACGGGGGAGAGACAGGCAGCACGAATAAGGGGACTGTATTTGAAAACAATTCTGAGACAAGATATTGCTTTCTTCGATAAGGAAACAAGCACTGGGGAGGTGGTAGGGAGGATGTCAGGTGACACAGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTTTGCAGTTAATGGCAACATTCGTTGGGGGATTTACTATAGCATTTATCAAAGGGTGGCTTCTTACTTGTGTCATGATGGCCACTCTTCCACTTCTAGTTTTGTCGGGAGCTGCTATGGCCGTCATCATAGGCAAGATGGCTTCTCGAGGTCAAACGGCTTATGCAAAAGCTTCACATGTAGTCGAACAGACAATTGGCTCAATAAGAACCGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTAAATAGTTATAGCAAATTTCTTGTGGATGCTTACAGATCAGGAGTGAGTGAAGGTTCCCTGGCTGGAGTGGGCCTAGGAACGGTTATGCTTGTGATTTTTGGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACGGTGATTAATGTGATTATTTCCTTCCTAACTGCTTCGATGTCTCTTGGACAAGCATCCCCTAGCCTGAGTGCTTTTGCTGCAGGTCAGGCTGCAGCTTATAAAATGTTCCAGACAATTGAAAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATACTAGAAGATATTCAAGGCGAAATAGATTTAAGGGATGTTTATTTCAGTTATCCAGCAAGACCTGAGGAACTGATATTTAATGGATTTTCTCTTCATATAGCTAGTGGTACAACTGCAGCGTTAGTTGGACAAAGTGGTAGTGGAAAGTCCACGGTTATCAGTTTGGTAGAAAGATTCTATGATCCACAGGCTGGTGAAGTTCTTATTGATGGCATAAACCTGAAAGAATTTCAGCTTAGGTGGATCAGAGGAAAAATAGGCCTTGTCAGCCAGGAGCCGGTGTTGTTTGCATCTAGCATTAAGGATAATATTGCTTATGGAAAGGAGGGAGCAACAATTGAAGAGATAAGATCTGCATCTGAACTTGCAAATGCTGCTAAATTCATTGATAAACTTCCACAGGGACTAAACACAATGGTCGGTGAACATGGAACTCAGTTGTCTGGTGGGCAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTAAAAAATCCGAGAATTCTACTTCTGGATGAAGCCACAAGTGCACTTGACGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGATCATGGTCAACAGAACAACTGTTGTAGTGGCACATCGTTTGAGCACAGTGAGAAATGCTGATATGATTGCTGTCATTCATAGAGGGAAGATGGTTGAGAATGGAACACACTCAGAATTACTGAAGGATCCTGAGGGAGCTTACTCTCAGCTTATACGCCTACAAGAAATAAGCAAGGAGACAGAACAGAATGCAGACCATGTTGGCAAGAGTGAACTTTCTTCTGAATCCCTAAGACAATCTAGTCAAAGGAAATCACTTCAAAGATCTATTAGCAGGGGGTCATCCTTAGGGAATAGTAGCCGTCATTCATTTTCAGTTTCCTTCGGTTTACCCACAGCAGTTAACGTTTCTGATCCTGAACATGAAAGCTCAATGCCCAAAGAAAAAGAGGTTCCACTCCACCGCCTTGCTTCCCTTAACAAGCCAGAGATTCCAGTTCTTCTGCTTGGATCTGTAGCTGCCATAATAAATGGTGTTATACTTCCAATATTTGGCCTGCTGATTTCCAGTGCCATCAAGACATTTTATGAACCGTTTGATAAGATGAAAAAGGACTCCCACTTTTGGGCACTGATGTTTTTGACCCTTGGTATTGTATCATTTTTCATAATTCCTGCGCGAGGATACTTTTTCTCTGTGGCAGGAAGTAAGTTAATCCAACGTATCAGGCTAATGTGTTTCGAGAAGGTTGTCAACAGGGAGGTTGGTTGGTTTGATGAGCCTGAAAACTCGAGTGGTTCAATAGGTGCAAGGCTTTCAGCAGATGCTGCTTCAGTGCGTGCCCTTGTTGGTGATGCCCTGGGACTATTGGTTCAAAATTTAGCGTCTGCAGTAGCAGGTTTAATCATTGCTTTCGTCGCATCTTGGCAGCTGGCACTAATTATTCTTGTCTTGATTCCCTTGATTGGGGTTAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTACGGAGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACGGTTGCTTCTTTCTGTGCTGAAGACAATGTTATGGAACTATACAGGAAGAAATGTGAGGGTCCCATGAAAACAGGGATACGGCAAGGGTTGATCAGCGGATCAGGATTTGGGGTTTCATTTTTCTTACTGTTTTGTGTTTATGCAACCAGTTTCTACGCAGGAGCTAGACTTGTTGACGCTGGAAAGACAACCTTCTCAAATGTTTTCCGGGTTTTCTTTGCATTAACTATGGCTGCTATTGGAATTTCCCAATCAAGCTCCTTTGCTCCTGACTCGAGCAAAGCCAGGACAGCTACTGCTTCCATATTTGGAATAATCGATAAGAAGTCACAGATAGACCCGAGTGATGAGTCTGGCACCACATTGGATAGTGTTAAGGGAGAAATTGAGCTTCGTCATGTGAACTTCAAATATCCTTCTAGGCCTGACGTACAGATTTTCCGTGACCTCAGCTTGACCATCCATTCTGGCAAGACGGTCGCTCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACTGTGATTGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGGCAAATTACACTTGATGGGATAGAAATTCGTCAGTTACAGCTCAAGTGGTTAAGACAGCAGATGGGCCTTGTAAGCCAGGAGCCAGTTTTGTTCAATGAAACAATACGTGCCAATATTGCCTATGGAAAAGGAGGCAATGCTACTGAAGCAGAAATCACGGCTGCAGCAGAATTGGCCAATGCCCATAAATTCATTAGTGGCTTACAACAGGGTTATGATACTTTAGTGGGGGAGAGGGGAACCCAATTATCTGGTGGGCAAAAGCAACGTGTAGCCATTGCACGAGCCATAATAAAAAGTCCAAAGATATTACTCCTTGATGAGGCGACGAGTGCCTTGGATGCAGAGTCAGAAAAAGTTGTTCAAGATGCATTAGAGAAAGTCATGGTGAACAGAACCACTGTGGTCGTGGCACATCGTCTATCCACAATAAGAAATGCAGATGTCATTGCTGTTGTCAAAAATGGAGTCATAGTGGAGAAAGGAAAACATGAAGCACTCATTAAGGTCAGTGGTGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTTCAACAGTATGA 3843 0.4338 MGVENDEERKHDDTSTSENRAGTSTNGEREEKSKQKEKPETVPFFKLFAFADSTDILLMVVGTIGAIGNGMGLPIMTLLFGEMIDSFGSNQQNPNVVEAVSKVSLKFVYLAVGSGMAAFLQVTSWMVTGERQAARIRGLYLKTILRQDIAFFDKETSTGEVVGRMSGDTVLIQDAMGEKVGKFLQLMATFVGGFTIAFIKGWLLTCVMMATLPLLVLSGAAMAVIIGKMASRGQTAYAKASHVVEQTIGSIRTVASFTGEKQAVNSYSKFLVDAYRSGVSEGSLAGVGLGTVMLVIFGGYALAVWFGAKMIMEKGYNGGTVINVIISFLTASMSLGQASPSLSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIQGEIDLRDVYFSYPARPEELIFNGFSLHIASGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLNTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVENGTHSELLKDPEGAYSQLIRLQEISKETEQNADHVGKSELSSESLRQSSQRKSLQRSISRGSSLGNSSRHSFSVSFGLPTAVNVSDPEHESSMPKEKEVPLHRLASLNKPEIPVLLLGSVAAIINGVILPIFGLLISSAIKTFYEPFDKMKKDSHFWALMFLTLGIVSFFIIPARGYFFSVAGSKLIQRIRLMCFEKVVNREVGWFDEPENSSGSIGARLSADAASVRALVGDALGLLVQNLASAVAGLIIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYGEASQVANDAVGSIRTVASFCAEDNVMELYRKKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATSFYAGARLVDAGKTTFSNVFRVFFALTMAAIGISQSSSFAPDSSKARTATASIFGIIDKKSQIDPSDESGTTLDSVKGEIELRHVNFKYPSRPDVQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIRQLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKGGNATEAEITAAAELANAHKFISGLQQGYDTLVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESEKVVQDALEKVMVNRTTVVVAHRLSTIRNADVIAVVKNGVIVEKGKHEALIKVSGGFYASLVQLHTSASTV* 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2155 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 714 1000 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2155 1280 Pfam ABC transporter transmembrane region 60 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2155 1280 Pfam ABC transporter transmembrane region 714 985 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2155 1280 Pfam ABC transporter 1054 1203 IPR003439 GO:0005524
Pvu7g2155 1280 Pfam ABC transporter 401 549 IPR003439 GO:0005524
Pvu7g2155 1280 MobiDBLite consensus disorder prediction 639 667 - -
Pvu7g2155 1280 Gene3D ABC transporter type 1, transmembrane domain 105 1009 IPR036640 GO:0005524|GO:0016021
Pvu7g2155 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1025 1272 IPR027417 -
Pvu7g2155 1280 MobiDBLite consensus disorder prediction 1 38 - -
Pvu7g2155 1280 CDD ABC_MTABC3_MDL1_MDL2 1035 1273 - -
Pvu7g2155 1280 Gene3D - 1025 1279 IPR027417 -
Pvu7g2155 1280 MobiDBLite consensus disorder prediction 24 38 - -
Pvu7g2155 1280 CDD ABC_MTABC3_MDL1_MDL2 382 620 - -
Pvu7g2155 1280 SUPERFAMILY ABC transporter transmembrane region 695 1019 IPR036640 GO:0005524|GO:0016021
Pvu7g2155 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g2155 1280 PANTHER - 13 1276 - -
Pvu7g2155 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1035 1272 IPR003439 GO:0005524
Pvu7g2155 1280 ProSitePatterns ABC transporters family signature. 1175 1189 IPR017871 GO:0005524
Pvu7g2155 1280 MobiDBLite consensus disorder prediction 626 667 - -
Pvu7g2155 1280 SUPERFAMILY ABC transporter transmembrane region 46 366 IPR036640 GO:0005524|GO:0016021
Pvu7g2155 1280 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 13 1276 - -
Pvu7g2155 1280 MobiDBLite consensus disorder prediction 1 17 - -
Pvu7g2155 1280 CDD ABC_6TM_Pgp_ABCB1_D2_like 703 1018 - -
Pvu7g2155 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 618 IPR003439 GO:0005524
Pvu7g2155 1280 ProSitePatterns ABC transporters family signature. 521 535 IPR017871 GO:0005524
Pvu7g2155 1280 SMART AAA_5 409 595 IPR003593 -
Pvu7g2155 1280 SMART AAA_5 1062 1249 IPR003593 -
Pvu7g2155 1280 Gene3D - 380 637 IPR027417 -
Pvu7g2155 1280 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 343 - -
Pvu7g2155 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 620 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2155 Pvu-Chr7 44828291 44833761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2155 35 1274 Calmodulin-binding Proteins AT2G36910 44.888 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2155 K05658 - gmx:100777909 2177.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2155 7 44828291 44833761 Pvu7g2155 7 44828291 44833761 ECH
Pvu1g2255 1 48068660 48075616 Pvu7g2155 7 44828291 44833761 PCT