Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2149 ATGGAAAACCACCACCAAATGCAACAACACCGTCATCAATTCATGAATCTTGATCCTACAACCGTCAACACCGGACAGCATCACGATCCTTCCGTCAAAGAACTGGATTTTTTCTCATCAACTTCACCGTCTAAGAACACTCATACTGATAACTCAAATACTCATTCAAACATTCCTAAAGAGAACGGATCACAACCTCTTTTCACTGATCAGTTCATCAATACCACGCTGAATTTAATGTGTCCGAGTCAGACTGATGAATTGTCAAGATCAACACCAACAGATCAAGATCCTAAATCTCCTCCGCTGAATACACTCGAAAAGGAGTTTCTGAGACTACAAGAAGAGAATTACAAGTTGAAAACTATGTTGGACCAAATCACCAAAAACTACCACCATCTACAATTTTTCCTTGCTATGCAGAAGCAAAAGCCGTATCAGAACGGGGAGAAAAATGATAATATGTCTGGTCAACATTTATTGGACCCACTATCATGCACCAAATTAGACGCTAATGTTGCTGCATCAGTCTCCGATGATAAATCTGGTCAAGAGGCTCATCATGATCGTGTAGAAGATGTTGTTGAACAATCGTCCTCACAGAGTTTGGGATCATCCAAGTGTCCCAAGTTTGAAGAATCTAAGCCCAGTGAGACTCCTTTCAGAAGAGCCAGAGTTTCCGTGCGTGCAAGATCAGAAGCTCCGGTGATTTGCGATGGATGTCAATGGAGGAAATATGGGCAAAAAATATCCAAGGGTAATCCCTGTCCTCGTGCCTACTATCGTTGCACCATGGCAGTAGGATGCCCGGTTCGTAAACAGGTGCAAAGATGCACAGAGGACATGAGTGTGTTGATAACAACTTACGAAGGCAATCACAACCACCCTCTTCCACCTTCAGCCACGGTCATGGCCAATTCTACCTCAGCAGCTGCAGCTATGTTATTATCTTCTTCTTCAGGTTCAATAGCTAGTAACGAAGCACTAAACAACAGTGTAGGAGTATTCTCTTCCATGCCCTACATCCCAATGCCAACGTTCTCAGCCTCTGCACCATTTCCCACTATCACCCTTGACATGACCACCAACCCTACGCAACTGCATCGGGACACCTCTCTTCCATTGCTTGCAACTACTTTTCCTCATCTACTAGGGCACCCTATCTTCTTCCCTCACAAAATCCAACATTCACTAGGCCAAAGACAACCTTCGTTTATGACCGATGTGATGACTGCAGCTGTTGCTTCGAATCCAAATTTCACTGTAGCATTAGCAGCAGCTATCTCGTCAATTCTTGGAGCTTCTAGAGGCAATGATGGAAATAATAACAATAGTAACGGTAGAAATGTTCTTGCCCTTGGAACATCTATGTTACCTGAATCCACTTAA 1389 0.4341 MENHHQMQQHRHQFMNLDPTTVNTGQHHDPSVKELDFFSSTSPSKNTHTDNSNTHSNIPKENGSQPLFTDQFINTTLNLMCPSQTDELSRSTPTDQDPKSPPLNTLEKEFLRLQEENYKLKTMLDQITKNYHHLQFFLAMQKQKPYQNGEKNDNMSGQHLLDPLSCTKLDANVAASVSDDKSGQEAHHDRVEDVVEQSSSQSLGSSKCPKFEESKPSETPFRRARVSVRARSEAPVICDGCQWRKYGQKISKGNPCPRAYYRCTMAVGCPVRKQVQRCTEDMSVLITTYEGNHNHPLPPSATVMANSTSAAAAMLLSSSSGSIASNEALNNSVGVFSSMPYIPMPTFSASAPFPTITLDMTTNPTQLHRDTSLPLLATTFPHLLGHPIFFPHKIQHSLGQRQPSFMTDVMTAAVASNPNFTVALAAAISSILGASRGNDGNNNNSNGRNVLALGTSMLPEST* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2149 462 MobiDBLite consensus disorder prediction 211 226 - -
Pvu7g2149 462 MobiDBLite consensus disorder prediction 83 101 - -
Pvu7g2149 462 MobiDBLite consensus disorder prediction 18 67 - -
Pvu7g2149 462 Pfam WRKY DNA -binding domain 239 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g2149 462 MobiDBLite consensus disorder prediction 83 104 - -
Pvu7g2149 462 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 446 IPR044810 GO:0003700
Pvu7g2149 462 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g2149 462 Coils Coil 103 123 - -
Pvu7g2149 462 SUPERFAMILY WRKY DNA-binding domain 231 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g2149 462 MobiDBLite consensus disorder prediction 436 462 - -
Pvu7g2149 462 MobiDBLite consensus disorder prediction 175 226 - -
Pvu7g2149 462 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g2149 462 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g2149 462 MobiDBLite consensus disorder prediction 35 67 - -
Pvu7g2149 462 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 28 446 - -
Pvu7g2149 462 MobiDBLite consensus disorder prediction 181 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2149 Pvu-Chr7 44775550 44778536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2149 106 432 WRKY Transcription Factor Family AT4G04450 41.310 1.93e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu7g2149 WRKY 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2149 - - vun:114192179 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2149 7 44775550 44778536 Pvu7g2149 7 44775550 44778536 ECH
Pvu1g2260 1 48108877 48112906 Pvu7g2149 7 44775550 44778536 PCT