Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2141 ATGATGACAATGAAGCTGCTTTTGGTAGCAGTTGAACTTGCATGCTTAGTTTCTGGGATCTTCTCCTTTGGATCTGAAACACTGTCTCAGCTTTCTTTCTTAGAAAATGGTGTCGTTTCAACTCGCCCTTCTTCATCTCAACCTCAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGGAGCTCATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTGTTCATTTGGAGGGGGGAGGATGGTGTAATACCATCAGAAATTGTGTCTATAGAAAAAATACTCGTCGTGGCTCCTCAAAATTCATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAATTGGAACAGAGTTAAGTTACGGTATTGTGATGGGGCATCTTTCAGTGGAGATGGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCGAAAGGAATGCAAAAAGCCAACCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCTATAATACATTGTGATGAGTTCAGGAGCTTATTTCCAGAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTCTTTCTTGATGCAATTGATGTATCTGGGGGACGCACACTGAGGAATCTGTTTGGAGGTGTGGTTCAGTTACAGGATGTACAAAAAAATCTTCCAAAAAGTTGTCTCAACCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATCGAACATATTGAAACCCCGTTGTTTCTACTCAACACAGCTTATGATGTTTGGCAGGTCCAAGCCAGTTTAGCACCACCTTCTGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCCAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAACCAAATGCTGAGTGACATTAAAGACTTCTCAAAGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATTGAGGACAAGCCAATTGCAGTAGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAGCAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1263 0.4228 MMTMKLLLVAVELACLVSGIFSFGSETLSQLSFLENGVVSTRPSSSQPQPQPLMVDLTLIQGAHSKGAVCLDGTLPGYHLDRGFGSGADSWLVHLEGGGWCNTIRNCVYRKNTRRGSSKFMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDGEDESAQLQFRGQKIWLAAMEELMSKGMQKANQALLSGCSAGGLASIIHCDEFRSLFPESSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQDVQKNLPKSCLNQLDPTSCFFPQNMIEHIETPLFLLNTAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQIQFLQDFRNQMLSDIKDFSKSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDSSCHNLVFNFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2141 420 PANTHER PECTIN ACETYLESTERASE 3 418 - -
Pvu7g2141 420 PANTHER NOTUM-RELATED 3 418 IPR004963 GO:0016787
Pvu7g2141 420 Pfam Pectinacetylesterase 50 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2141 Pvu-Chr7 44683702 44690967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2141 7 419 Carbohydrate Esterase AT3G62060 65.640 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2141 K19882 - gmx:100811787 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2289 1 48376243 48380225 Pvu7g2141 7 44683702 44690967 ECH
Pvu7g2141 7 44683702 44690967 Pvu1g2289 1 48376243 48380225 ECH
Pvu7g2141 7 44683702 44690967 Pvu7g2141 7 44683702 44690967 ECH
Pvu3g1294 3 30522226 30529245 Pvu7g2141 7 44683702 44690967 ECH
Pvu1g2267 1 48179963 48185922 Pvu7g2141 7 44683702 44690967 PCT