Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2131 ATGGTTTCTTCTTCCACCATACCTCTCTCTTCTTCCATTTCCATATTCAGAAACCCCTCTCTCCAACTCCTCAGAAGACCAACCACCTCCGTTTCATTCAACGCCCTTCCCCGTAACCCCACGCTCTCTTCCGTTCCTTCGGCCATTGCCACCCCCACTTCTTCCATTCTCACCCAACAACCCTTCGAGGGTTTAACTCTGGACGACGTTAACAATAGCCTCCAATTTGGCTATGACCACCAACCCGGCACCACCCCTGTCCACGTCAGCGACCACGAACTCGACATTTCCAAGTTGTCTTTACCTTCCTCCCTCGTCCATGCCCTACAAAAACGTGGAATCACAAGCCTCTTTCCCATTCAGAGAGCTGTGTTACTGCCTGCACTAGAAGGTAGAGATATCATTGCTCGAGCAAAGACCGGCACTGGCAAAACATTGGCATTCGGAATTCCAATTCTCAAGGGCCTCACTGCTGATGAAGATGGTCATGAGCAAAATTCTCACAGGAGGCATGGGAATCTTCCCAAGGCATTGGTCCTAGCACCTACTAGGGAGTTGGCCAAGCAAGTTGAGAAGGAGATGCAAGAATCAGCACCTTACCTGAAAACGGTTTGTGTTTATGGGGGTGTTTCTTATGTAACACAGAAGAGTGCACTTTCGCGCGGTGTTGATGTGGTGGTTGGAACACCGGGTAGAATAATTGATCTAGTGAATGGAGGTAGCCTTAATCTGAGTGAGGTGCAGTATTTGGTGCTTGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAGGTCATTTTGGATAAGGTTCCCACGCAGCGCCAGACCATGCTGTTTTCTGCTACCATGCCTGGTTGGGTCAAGAAACTGTCCAGAAAGCATTTGAACAATCCTTTGACAATTGATTTGGTTGGTGAACAAGAAGAGAAACTTGCTGAAGGGATCAAACTTTATGCTTTATCAGCCACTGCCACTTCAAAACGGATAGTTCTTTCTGATCTTATAACTGTTTATGCAAAGGGTGGAAAGACTATTGTTTTTACGCAGACAAAAAGGGATGCTGATGAAGTATCGATGGCATTAACGAGAAGTATGGCTTCTGAAGCACTGCATGGTGATATATCTCAGCATCAGAGAGAGAGAACATTAAATGGTTTTCGGCAAGGGAAATTCACAGTGCTTGTTGCCACTGATGTTGCAGCTCGTGGACTTGATATTCCCAATGTTGATTTGGTTATACATTATGAACTTCCCAATGATGCTGAGACTTTTGTACATCGCTCTGGTCGCACTGGGCGTGCAGGAAAAGAGGGTACTGCCATATTGATGTACACCAGTAGCCAGAAGAGAACAGTTAGATCCCTTGAGCATGATGTTGGCTGCAAATTTGAATTCATTAGTCCACCAGCTATGGAAGAAATTTTGGAGTCATCTGCTGAGCAAGTTGTTGCTACACTTAATAGAGTTCATCCAGAGTCTGTTGAATTTTTCACTGCAACTGCACAAAAACTGGTTGAAGAACAAGGAGCAAGAGCCCTTGCAGCTGCTCTAGCACATATGAGTGGATTCTCTAGACCTCCATCATGTCGGTCTCTTATCAATCATGAACAGGGATGGATTACTTTGCAACTGACTCGAGATTCAGACACTTCTGGAAGATTTTTTTCTGCAAGATCTGTCACTGGGTTTCTTTCTGATGTTTATTCTTCAGCTGCTGATGAAGTTGGAAAAATACATTTAATTGCAGATGAGAGGATTAAAGGAGCTGTTTTTGATCTCCCGGAGGAAATTGCTAGAGAGTTGCTAAAAAAGGAAGTGCCATCTGGGAACACTATTTCCAAAATCACCAAGTTACCTCCTTTGCAAGATGATGAACCTGCAAGTGATTTCTATGGGAAGTTTTCTGACAGAGACAGAAGTAACCGAAGGGGTTCTAATTCTAGGGATCAAAGAGGCTTTAAAAGTTCACGGGGATGGGAAGGAGGCCAAGACTCTGATGATGAGTTTGGACGAGGCGGTAGAAATTTCAGATCAGGCAACAACAGGTCTCGAATGGGAAAAAACTGCGGCGATGACTGGCTAATTGGAGGTGGACGATCAAACAGATTTTCATCACCAAACAGAGGCGGCGGGCACGGAGGGGCCTGTTTTAATTGTGGACAACCTGGGCATCGAGCATCAGATTGTCGCCAAAAACGAGACTTTTTCTAG 2223 0.4539 MVSSSTIPLSSSISIFRNPSLQLLRRPTTSVSFNALPRNPTLSSVPSAIATPTSSILTQQPFEGLTLDDVNNSLQFGYDHQPGTTPVHVSDHELDISKLSLPSSLVHALQKRGITSLFPIQRAVLLPALEGRDIIARAKTGTGKTLAFGIPILKGLTADEDGHEQNSHRRHGNLPKALVLAPTRELAKQVEKEMQESAPYLKTVCVYGGVSYVTQKSALSRGVDVVVGTPGRIIDLVNGGSLNLSEVQYLVLDEADQMLAVGFEEDVEVILDKVPTQRQTMLFSATMPGWVKKLSRKHLNNPLTIDLVGEQEEKLAEGIKLYALSATATSKRIVLSDLITVYAKGGKTIVFTQTKRDADEVSMALTRSMASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDAETFVHRSGRTGRAGKEGTAILMYTSSQKRTVRSLEHDVGCKFEFISPPAMEEILESSAEQVVATLNRVHPESVEFFTATAQKLVEEQGARALAAALAHMSGFSRPPSCRSLINHEQGWITLQLTRDSDTSGRFFSARSVTGFLSDVYSSAADEVGKIHLIADERIKGAVFDLPEEIARELLKKEVPSGNTISKITKLPPLQDDEPASDFYGKFSDRDRSNRRGSNSRDQRGFKSSRGWEGGQDSDDEFGRGGRNFRSGNNRSRMGKNCGDDWLIGGGRSNRFSSPNRGGGHGGACFNCGQPGHRASDCRQKRDFF* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2131 740 MobiDBLite consensus disorder prediction 704 740 - -
Pvu7g2131 740 PANTHER - 46 731 - -
Pvu7g2131 740 SUPERFAMILY Retrovirus zinc finger-like domains 700 738 IPR036875 GO:0003676|GO:0008270
Pvu7g2131 740 MobiDBLite consensus disorder prediction 633 677 - -
Pvu7g2131 740 CDD DEADc 105 306 - -
Pvu7g2131 740 MobiDBLite consensus disorder prediction 615 687 - -
Pvu7g2131 740 CDD GUCT_Hera 534 613 - -
Pvu7g2131 740 Gene3D - 712 738 - -
Pvu7g2131 740 Gene3D - 324 524 IPR027417 -
Pvu7g2131 740 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 46 731 - -
Pvu7g2131 740 Gene3D - 95 309 IPR027417 -
Pvu7g2131 740 ProSiteProfiles Zinc finger CCHC-type profile. 720 735 IPR001878 GO:0003676|GO:0008270
Pvu7g2131 740 Pfam GUCT (NUC152) domain 526 626 IPR012562 GO:0003723|GO:0004386|GO:0005524
Pvu7g2131 740 SMART ultradead3 113 322 IPR014001 -
Pvu7g2131 740 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 334 479 IPR001650 -
Pvu7g2131 740 Pfam Zinc knuckle 719 735 IPR001878 GO:0003676|GO:0008270
Pvu7g2131 740 SMART c2hcfinal6 719 735 IPR001878 GO:0003676|GO:0008270
Pvu7g2131 740 Pfam Helicase conserved C-terminal domain 335 439 IPR001650 -
Pvu7g2131 740 SMART helicmild6 359 439 IPR001650 -
Pvu7g2131 740 CDD SF2_C_DEAD 331 448 - -
Pvu7g2131 740 Pfam DEAD/DEAH box helicase 118 294 IPR011545 GO:0003676|GO:0005524
Pvu7g2131 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 458 IPR027417 -
Pvu7g2131 740 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 125 305 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2131 Pvu-Chr7 44622916 44628089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2131 99 461 Eukaryotic Initiation Factors Gene Family AT1G72730 35.150 1.50e-61 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2131 - - gmx:100815040 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2280 1 48299401 48305198 Pvu7g2131 7 44622916 44628089 ECH
Pvu7g2131 7 44622916 44628089 Pvu7g2131 7 44622916 44628089 ECH
Pvu1g2280 1 48299401 48305198 Pvu7g2131 7 44622916 44628089 PCT