Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2124 ATGAATCATGATGGTTCATTAATTCTCCACTACAGGTTCTATGCTCAAGAGCATAAACTTGCCTCCATTAACATAAATGCATATATGGAAGGAGAAGTCAAACTTATTTCAAAATGGATAAAAGTTTGTTCACTTCTCTTCTTCTTCTTCTTCTGTCACACATCAAACTTTCATTTTATTTTCTCTGCGAATTCCTGTTTTCATTGGTACACAACTCAAATGGGTATTAAGGGTTTAACTAAGCTTTTGTCGGATAATGCCCCAAAGTCCATGAAGGAGAACAAATTCGAGAGCTACTTCGGTCGCAAGATCGCTGTTGACGCCAGCATGAGCATTTATCAGTTCCTTATTGTCGTTGGAAGAAGCGGAACCGAAATGCTCACTAATGAAGCCGGTGAAGTTACCAGTCATTTACAAGGGATGTTATCGCGGACAATTAGACTTCTTGAAGCCGGGATGAAGCCAGTATATGTTTTTGATGGGAAGCCACCAGATTTGAAGAAACAAGAGCTGGCAAAACGTTACTCGAAGAGGGCCGAGGCTACTGAGGATTTATCAGAAGCCTTAGAGAGTGCCAATAAAGAAGACATTGAGAAATTCAGTAAACGGACTGTGAAGGTGACAAAGAAGCATAATGAAGACTGCAAAACACTTTTAAGACTTATGGGAGTTCCCGTTGTTGAGGCACCCTCAGAAGCAGAGGCTCAATGTGCTGCACTTTGCAAAGCTGGAAAGGTTTATGCTGTGGCTTCTGAAGATATGGATTCCTTAACATTTGGAGCTCCTAAATTTCTTCGCCACCTAATGGATCCAAGCTCCAAAAAAATTCCAGTCATGGAATTTGAAATTGCAAAGATTTTGGAGGGGCTAAATCTGACCATGGACCAATTTATTGACTTATGCATTCTTTCTGGCTGTGATTATTGTGAAAGTATTCGAGGAATTGGGGGACAGACAGCTTTGAAACTCATACGAGAACATGGCTCTATCGAAAATATACTGGAAAACATAAACAAAGAGAGGTACACAATACCAGATAATTGGCCATATCAAGAGGCTCGACAGCTTTTTAAAGAACCAATGGTTTTAACTGATGAAAAGGAACTTGATATTAAGTGGACTGCTCCAGATGAAGAAGGGTTAATAACATTTCTGGTAAATGAGAATGGCTTCAACAGTGATAGAGTGACTAAGTCGATAGAAAAGATTAAAGCAGCAAAGAACAAATCATCACAAGGCCGATTGGAATCATTTTTTAAGCCAACAGCAAATCCATCTGTACCAATCAAACGCAAGGAAACACAACCGAATAATGCTAAAGAAACTAACAAAAAGGCCAAGGGTGCTGGTGGTAGGAAGAAGAAATAG 1368 0.3969 MNHDGSLILHYRFYAQEHKLASININAYMEGEVKLISKWIKVCSLLFFFFFCHTSNFHFIFSANSCFHWYTTQMGIKGLTKLLSDNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMLSRTIRLLEAGMKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALESANKEDIEKFSKRTVKVTKKHNEDCKTLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFEIAKILEGLNLTMDQFIDLCILSGCDYCESIRGIGGQTALKLIREHGSIENILENINKERYTIPDNWPYQEARQLFKEPMVLTDEKELDIKWTAPDEEGLITFLVNENGFNSDRVTKSIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKETQPNNAKETNKKAKGAGGRKKK* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2124 455 SMART HhH_4 294 327 IPR008918 GO:0003677|GO:0003824
Pvu7g2124 455 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 74 445 IPR006084 -
Pvu7g2124 455 Gene3D - 83 294 - -
Pvu7g2124 455 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 292 427 IPR036279 -
Pvu7g2124 455 Pfam XPG N-terminal domain 74 181 IPR006085 GO:0004518
Pvu7g2124 455 SUPERFAMILY PIN domain-like 75 307 IPR029060 -
Pvu7g2124 455 Hamap Flap endonuclease 1 [fen]. 74 420 IPR023426 GO:0016788
Pvu7g2124 455 CDD H3TH_FEN1-Euk 295 363 - -
Pvu7g2124 455 SMART 53exo3 102 379 IPR002421 GO:0003677
Pvu7g2124 455 SMART xpgn3 74 181 IPR006085 GO:0004518
Pvu7g2124 455 Coils Coil 172 192 - -
Pvu7g2124 455 ProSitePatterns XPG protein signature 2. 223 237 IPR019974 GO:0016788
Pvu7g2124 455 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 101 115 IPR006084 -
Pvu7g2124 455 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 155 174 IPR006084 -
Pvu7g2124 455 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 219 236 IPR006084 -
Pvu7g2124 455 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 240 260 IPR006084 -
Pvu7g2124 455 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 297 312 IPR006084 -
Pvu7g2124 455 CDD PIN_FEN1 77 405 - -
Pvu7g2124 455 Pfam XPG I-region 223 307 IPR006086 GO:0004518
Pvu7g2124 455 PANTHER FLAP ENDONUCLEASE 1 74 445 - -
Pvu7g2124 455 MobiDBLite consensus disorder prediction 407 455 - -
Pvu7g2124 455 Gene3D - 295 359 - -
Pvu7g2124 455 SMART xpgineu 220 292 IPR006086 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2124 Pvu-Chr7 44572185 44579438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2124 74 435 Core DNA Replication Machinery Family AT5G26680 85.359 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2124 K04799 - gmx:100792878 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2124 7 44572185 44579438 Pvu7g2124 7 44572185 44579438 ECH