Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2119 ATGCCTCTGTATGAGTTATACCGTCTGGCTAGAGAGAAGCTTGGTACAGAGAATAACGGCACACGTGCATCTGATCAATGTTCCTCACCTGAGAATGATTTTTTTGAGCTAGTTTGGGAGAATGGTCAGATTTCGAGCCAGGGTCAGTCTAGTAGGGTTAGAAGGAGCCCATCTTGCAGAAGTTTGCCATCTCACTGCTTACCATCTCACAGTCCAAAGGGTAGAGACAAAGATGTAGGATGTGGTGCCAGCAAGATGGGAAAATTTAGAGATTTAGACTCTGGATTGAGTGAAATTTCAATGTCGGTGCCGTCCCGTGAAATTGATTTCTGTCAAGACGAAGATGTGTTACCTTGGTTTGATTACGCAGCAATGGATGGTTCTTTGCAACATGACTATGGTTCTGATTTCCTCGCTACCTCAACTAGTTTTACTCTATTGGATAAAAAAAGTCATACCAATGTGGCTTTGAGGGATTCTCATAAAACTTCTGAAGAACATGAGAATGCTTTCAAGGGTTCTTCAGCTGAACAGGTTGAGAGTACCGGACCCAAATCTAGCACCAGTCAGTTATACCCTCCATCATTGCATCATTGTCAAACATCTTTTGTATCTTCAAGATCCAGAGCGTCAGATATAACTGAAAATAACAATACTAGTAATGCAAACCAGGATGCCACTTATGGCGAAATTACCAATTTTCTATCTTCCTCAAGTGATTTTTCTAGCCCAAAGGGGAAGAAGCAAGAGCCACCTCTGCCTGGCAATGGTTCCAGTTCCACCATAATGAATTTCTCCCATTTCGCTAGGCCTGCCGCAATGGTAAGAGCTAATCTTCAGAACATTGGCTTGAAATCTGGTTTGTCTTCAGCAAGACCAGACAGTATGGAAATTAAGAATAACGGTGCAGCTGCAACTAGCAGCAATCCTCCTGAATCAATTGTTATTGATTCAAGTGGTGAATGTTCGAAGGAACTGACCATGCACTGTCAGCAGGTTGTGGATCAATCTAGGTCCAGGACCGATTTGAACACTTCACTGTCGAAAGCTGTTGAACAGAATGCAGTACTTTCTAAGCAGTCAGAGCCTGCTTGTAATGAGAGTTCCACTAAGATTGACCAAATTGCCGATCAAGTTCTTGGTGACAGTGGTGCTAAAGGGCAGACAACTACTGAAAAAAGTATGGAGGCAGCAGTAGCCTCTTCCTCTGTTTGCTCTGGCAACGGTGCAGACAGAGGTTCAGATGAGCCAAATCAAAATTTGAAGCGAAAAAAAAAGACACCGATGAATCTGAGTGCCATAGATGCTGAAGAAGAATCAGCGGGTGTTAAAAAGGCAGCTGGAGGGCGTGGAGGTGCAGGTTCCAAGAGAACCCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGAATCAACGAGAAGATGCGTGCGTTGCAAGAACTCATTCCAAATTGCAATAAGGTGGATAAAGCCTCAATGCTGGACGAGGCAATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTATATATGCCTCCAATGATGTTACCTGCAGGAATGCAGCACATGCATGCACCACATATGGCTCCATTTACACCTGTGGGTGTTGGCATGCATATGGGATATGGTATGGGTTATGGGGTGGGAATGCCTGACATGAATGGTGGATCTTTAAGATTCCCTATGATTCAGGTGCCCCAGATGCCCCAGATGCAAGGAAGTCATATCCCTCTTGCCCATATGTCTGGACCTACTGCTTTACATGAGATGGCCAGATCAAATCTTCCAGGGCTTGGGCTTCCTGGACAAGGACATCCCATGCCAATGCCGCGAGCTCCCACGTTGCCTTTTTCAGGAGGACCTATCATGAATTCACCAGCTCTGGGGCTACATGCCTGTGGATCATCAGGACTTGTTGAAACCGTGGATTCAGCTTCTGCATCTGGCTTAAAGGATCAAATGCCAAATGTTGGCCCACTACTTAAGCAAAGCACTGGTGGCCGCGACTCAACAAGTCAGATGCCTACACATAGTGAGGCAGCTGTTGTTCAATTTGACCAATCTGCTTTGGTTCAAAGTAGCGGTCATACCTCTGAGGCTAATGCCAATGGAGCTGTTAATCCTTGTCCCCGCAGATAA 2175 0.451 MPLYELYRLAREKLGTENNGTRASDQCSSPENDFFELVWENGQISSQGQSSRVRRSPSCRSLPSHCLPSHSPKGRDKDVGCGASKMGKFRDLDSGLSEISMSVPSREIDFCQDEDVLPWFDYAAMDGSLQHDYGSDFLATSTSFTLLDKKSHTNVALRDSHKTSEEHENAFKGSSAEQVESTGPKSSTSQLYPPSLHHCQTSFVSSRSRASDITENNNTSNANQDATYGEITNFLSSSSDFSSPKGKKQEPPLPGNGSSSTIMNFSHFARPAAMVRANLQNIGLKSGLSSARPDSMEIKNNGAAATSSNPPESIVIDSSGECSKELTMHCQQVVDQSRSRTDLNTSLSKAVEQNAVLSKQSEPACNESSTKIDQIADQVLGDSGAKGQTTTEKSMEAAVASSSVCSGNGADRGSDEPNQNLKRKKKTPMNLSAIDAEEESAGVKKAAGGRGGAGSKRTRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHMHAPHMAPFTPVGVGMHMGYGMGYGVGMPDMNGGSLRFPMIQVPQMPQMQGSHIPLAHMSGPTALHEMARSNLPGLGLPGQGHPMPMPRAPTLPFSGGPIMNSPALGLHACGSSGLVETVDSASASGLKDQMPNVGPLLKQSTGGRDSTSQMPTHSEAAVVQFDQSALVQSSGHTSEANANGAVNPCPRR* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2119 724 MobiDBLite consensus disorder prediction 661 688 - -
Pvu7g2119 724 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Pvu7g2119 724 MobiDBLite consensus disorder prediction 703 724 - -
Pvu7g2119 724 MobiDBLite consensus disorder prediction 670 688 - -
Pvu7g2119 724 CDD bHLH_AtPIF_like 459 521 - -
Pvu7g2119 724 Pfam Helix-loop-helix DNA-binding domain 463 509 IPR011598 GO:0046983
Pvu7g2119 724 MobiDBLite consensus disorder prediction 155 173 - -
Pvu7g2119 724 Gene3D - 454 517 IPR036638 GO:0046983
Pvu7g2119 724 SMART finulus 465 514 IPR011598 GO:0046983
Pvu7g2119 724 MobiDBLite consensus disorder prediction 155 262 - -
Pvu7g2119 724 MobiDBLite consensus disorder prediction 383 415 - -
Pvu7g2119 724 MobiDBLite consensus disorder prediction 286 312 - -
Pvu7g2119 724 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 456 519 IPR036638 GO:0046983
Pvu7g2119 724 MobiDBLite consensus disorder prediction 383 464 - -
Pvu7g2119 724 PANTHER TRANSCRIPTION FACTOR PIF3 1 687 IPR044273 GO:0003700|GO:0006355
Pvu7g2119 724 MobiDBLite consensus disorder prediction 416 444 - -
Pvu7g2119 724 PANTHER TRANSCRIPTION FACTOR PIF3 1 687 - -
Pvu7g2119 724 MobiDBLite consensus disorder prediction 174 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2119 Pvu-Chr7 44490412 44495343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2119 1 582 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 35.570 9.73e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g2119 HLH 7.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2119 K12126 - gmx:100794974 1067.37