Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2107 ATGGCTGCCATGAAGCTCATTGCAATATGTCAGGCGGGAGGCAAGTTTTTGACTGGAAAAGACGGTTGTTTGTCATATAAAGGTGGTGATGCTCATGCCATAGACATTGATGATGAAATGAAGTTTGAGGAGTTCAAGGTGGAAGTGGCCGAAATGTTTAATATTAGAACTGATAGCATGTCTATCAAGTATTTCCTTCCCGGAAACAAGAAGACTCTCATTACTATATCTAACGACAAGGATCTAAAGCGCATGATTAAATTTCATGGGAGTTCTTCTACTGTTGATATTTATATCCTTTTTGAAGAGGTAGTTGCCCTTGAGGTGTCAAACATGCCTGGCAGTAGGTCAAGCAGAACAACCTTGTCTGAAACAGTAGCACCGACACCACTCAATGCTTGTCACAGTCATGTTGTTGATACTGTGCTTGATGTTGTTCATGATACCAATCAAATTGATACAAATATGGGTATGGACATGCCCCTGGAAATTTCTCCTTGTCTCCCTATTCAATCCTCAAACGATGAGAAGTATGCCAAAGGGGCACAGCAGTGGCAGAATACTATAACAGGGGTGGGTCAAAGGTTCAGCAGTGTACATGAATTTCGAGAATCCTTGCGTAAATATGCCATCGCTCATCAATTTGCATTTAAATATAAGAAAAATGATAGTCATCGTGTAACTGTTAAATGCAAAGCAGACGGTTGTCCTTGGAGAATTCATGCATCAAGGTTGTCAACTACACAGTTGATATGTATCAAGAAAATGAATTCAACTCATACTTGTGATGGGGCTTTTGCAACAACAGGGCATCAAGCAACTAGGAGCTGGGTAGCCAGTATTATAAAGGAGAAGTTGAAAGATTTTCCGGATTACAAGCCCAAGGACATTGTCAATGACATCAAACAGGAATATGGAATTCAACTTAACTATTTTCAAGCGTGGCGTGGGAAAGAGATTGCTAAGGAGCAGCTTCAGGGTTCCTATAAAGAGGCATACAGTCAGTTACCTTTCTTCTGTGAAAAATTAATGGAGGCTAATCCTGGGAGTCTTGCCATGTGCACAACAAAGGAAGACTCAAGTTTCGATCGTCTCTTTGTATCACTTCATGCATCATTGCATGGCTTCCAACAAGGTTGCCGACCACTGATTTTCCTTGATAGCATTCCATTGAGGTCAAAATACCAAGGGACACTGTTAGCAGCGACCGCTGCAGATGCTCATGATGGTGAATATCCCGTTGCCTTTGCTATTGTTGATGATGCGGAATCAGATGATAGCTGGCATTGGTTCTTACTTCAACTGAAATCTGTGCTTTCAACATCTTGTCCCATAACATTTGTAGCAGACAGAGAGAAGGGGCTGAAGACTTCAATTGCGGAGATATTTGAAGGTTCTTTTCATGCATACTGCCTGCGATACTTAACTGAGCAACTTTTTAGAGACTTGAAAGGGCAGTTTTCTCATGAGGTAAAGCGACTCATGATTGAAGATTTATATGCTGCTGCGTATGCCACCAAACCAGAAGGCTTTCAAAACTCAATGGAGAGCATTAAAAAGATTTCTGAAGAAGCCTACAACTGGATTATTCAAAGTGAACCTCAGAACTGGGCAAATTCAATTTTTCAGGGTACTAGGTATAATCACATGACATCAAACTTTGGGGAGCTGTTCTATAGTTGGGTAGCTGATGCAGATGAATTGCCGATAACACAGATGGTCAATGTAATTAGGGGTAAGATTATGGAGTTGATAGGTGTCAGAAAGGCAGCATCTGATCAATGGGAAACTAGGTTGAGTCCATCCATGGAAGATATGCTAAAGAAGGAAAGTCAAAAAAATCATTCATTTTCTGTTCTGCAATCAACCTGTAGCACCTATGAAGTTTGTGGTGACACAACTGAGGTGGTTGATATTGACAGGTGGGAATGTAGTTGTAAAGCCTGGCAACTGACTGGTGTGCCATGCTGTCATGCCATTGCCGTAATTGGTGGCATTGGCCAAAGTGTTTATGATTATTGCTCCAGATACTGTACAACCGAGAGCTACAGGTTGACATACTCGGAGATTGTACATCCAATTTCAGACGTGGAATTGTCTGTTTCGAAAGATTCTCAGCTTGTGGTAACTGTAACACCTCCACCCACCAAAAGACCGCCTGGTCGCCCAGCTACAAAGCGATTTGGATCTCAAGAAGTTGTCAAGCGCCATCTCCATTGCAGCCGATGCAAGGGACTTGGACATAACAAATCTACTTGCAAGGAGTAA 2268 0.4184 MAAMKLIAICQAGGKFLTGKDGCLSYKGGDAHAIDIDDEMKFEEFKVEVAEMFNIRTDSMSIKYFLPGNKKTLITISNDKDLKRMIKFHGSSSTVDIYILFEEVVALEVSNMPGSRSSRTTLSETVAPTPLNACHSHVVDTVLDVVHDTNQIDTNMGMDMPLEISPCLPIQSSNDEKYAKGAQQWQNTITGVGQRFSSVHEFRESLRKYAIAHQFAFKYKKNDSHRVTVKCKADGCPWRIHASRLSTTQLICIKKMNSTHTCDGAFATTGHQATRSWVASIIKEKLKDFPDYKPKDIVNDIKQEYGIQLNYFQAWRGKEIAKEQLQGSYKEAYSQLPFFCEKLMEANPGSLAMCTTKEDSSFDRLFVSLHASLHGFQQGCRPLIFLDSIPLRSKYQGTLLAATAADAHDGEYPVAFAIVDDAESDDSWHWFLLQLKSVLSTSCPITFVADREKGLKTSIAEIFEGSFHAYCLRYLTEQLFRDLKGQFSHEVKRLMIEDLYAAAYATKPEGFQNSMESIKKISEEAYNWIIQSEPQNWANSIFQGTRYNHMTSNFGELFYSWVADADELPITQMVNVIRGKIMELIGVRKAASDQWETRLSPSMEDMLKKESQKNHSFSVLQSTCSTYEVCGDTTEVVDIDRWECSCKAWQLTGVPCCHAIAVIGGIGQSVYDYCSRYCTTESYRLTYSEIVHPISDVELSVSKDSQLVVTVTPPPTKRPPGRPATKRFGSQEVVKRHLHCSRCKGLGHNKSTCKE* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2107 755 PANTHER F10A16.15 PROTEIN 52 752 - -
Pvu7g2107 755 CDD PB1_UP2 9 99 - -
Pvu7g2107 755 Pfam SWIM zinc finger 637 663 IPR007527 GO:0008270
Pvu7g2107 755 ProSiteProfiles Zinc finger SWIM-type profile. 627 667 IPR007527 GO:0008270
Pvu7g2107 755 Pfam MULE transposase domain 385 475 IPR018289 -
Pvu7g2107 755 SMART 26again6 642 669 IPR006564 GO:0008270
Pvu7g2107 755 Pfam MuDR family transposase 188 253 IPR004332 -
Pvu7g2107 755 PANTHER POLYPROTEIN, PUTATIVE-RELATED 52 752 - -
Pvu7g2107 755 SUPERFAMILY CAD & PB1 domains 21 94 - -
Pvu7g2107 755 Pfam PB1 domain 24 92 IPR000270 GO:0005515
Pvu7g2107 755 Gene3D - 25 101 - -
Pvu7g2107 755 SMART PB1_new 19 102 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2107 Pvu-Chr7 44388942 44392624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2107 5 87 MAP Kinase Kinase Kinase AT1G79570 30.588 9.44e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2107 K17604 - gmx:100797259 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2107 7 44388942 44392624 Pvu7g2107 7 44388942 44392624 ECH