Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2088 ATGCTACCGAAGCCCGAAACAAAAGCTGCATCGGCTTCTGCCGCCTTCTTCAAACCAGGCACTATCGTGGAAATCAGCTCTGAAGATGAAGGCTTTCGCGGTTCCTGGTTTTCCGGCACCATCATCCGCCAACTTCCCTCTGACAGGTTCCTGATAGAGTATCACAACTTGATGGCCGATGAGAAGAGCTCAAAGCGTTTGAGAGAAGCCCTGGATATACGCCAACTGCGGCCCATTCTCCCATCAGAGACAGGCCAAATATTTAAATTCGGGGATGAGGTTGATGCCTTCTACAACGACGGTTGGTGGGAGGGCTACATAACCGAGGAATTAGATAATAACAAATTCGCTGTGTATTTTAGGGCCTCAAAGGAGCAATTAGTCTTTTCCAAAGAACAACTTAGAATCCATAGAGAATGGTTTGATCACACGTGGGTCCCACCACTCCGACAGGATAAAGGTGAATCCAATGAAGCTGTGAAGACCGAGGAGTTTGGCAAAGGGGCTATAGTGGAGGTTAGCAGTGATGAAGATGGGTTCAGTGGAGCTTGGTTTGCTGCCACTGTTGTTGAGGCAAAGGGAAATGACAAGTTCGTTGTTGAATACCAGACTCTGTTAGCTGATGATGATGCTAATCTTTTAAAAGAGGAGATTGGTGCCATGCATATAAGGCCTCCTCCACCTGAGACTAATATTGATGGTCGATTCAATCTTCTTGACGAAGTTGATGCCCTTTACAATGATGGTTGGTGGGTCGGTGTGATTTCTAAAATTCTTACTGGTTCCAAGTATGTAGTCTACTTCAGGTCTTCCAATGAGGAACTAGAATTTCAGCACTCCGATTTGAGGCTGCACCAGGACTGGATTCATGGCAAATGGGTTATGCTCTCTAAGGCGATGGAGTTGTGA 909 0.4631 MLPKPETKAASASAAFFKPGTIVEISSEDEGFRGSWFSGTIIRQLPSDRFLIEYHNLMADEKSSKRLREALDIRQLRPILPSETGQIFKFGDEVDAFYNDGWWEGYITEELDNNKFAVYFRASKEQLVFSKEQLRIHREWFDHTWVPPLRQDKGESNEAVKTEEFGKGAIVEVSSDEDGFSGAWFAATVVEAKGNDKFVVEYQTLLADDDANLLKEEIGAMHIRPPPPETNIDGRFNLLDEVDALYNDGWWVGVISKILTGSKYVVYFRSSNEELEFQHSDLRLHQDWIHGKWVMLSKAMEL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2088 302 SMART agenet_At_2 163 231 IPR014002 -
Pvu7g2088 302 SMART agenet_At_2 15 84 IPR014002 -
Pvu7g2088 302 SMART agenet_At_2 234 290 IPR014002 -
Pvu7g2088 302 SMART agenet_At_2 86 142 IPR014002 -
Pvu7g2088 302 Pfam Agenet domain 91 149 IPR008395 -
Pvu7g2088 302 Pfam Agenet domain 20 81 IPR008395 -
Pvu7g2088 302 Pfam Agenet domain 168 228 IPR008395 -
Pvu7g2088 302 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 13 296 - -
Pvu7g2088 302 Gene3D - 153 236 - -
Pvu7g2088 302 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 13 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2088 Pvu-Chr7 44234844 44237882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2088 175 296 PHD Transcription Factor Family AT5G58610 29.139 2.39e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2088 - - var:108325018 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2088 7 44234844 44237882 Pvu7g2088 7 44234844 44237882 ECH