Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2081 ATGGAGTCTTTCGAGCCCAACGTAGATTCAAGTAATTCAGAAACGTTGCGAGAATCTAATCAAAAGAAGCGCAGGAAAATCGGAGACCACGCCGCCGATCACAATTCCGCCAACGCTGTCCCTTGGAGATCCGACGCGGAGCAACGGATCTACTCCCGCCGCCTCGTCGAGGCTCTGCGCCGAACCCCGTCATCGGCGGCCAAGCCTAGAGCAGCCGGCCAGGTACGCGAGGCCGCCGACCGAGTCCTCGCCGCCACCGCCAGAGGCCGAACGCGGTGGAGCCGCGCGATTCTCCGACGGTGGAGGAAGCTCCGCACGCCACACAAGAAGGCGAAGAAGACGTCGTCCACCGGATTGAAGAGAACGAGGATCAACGGCGGAGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTTGGCCGGTTGGTTCCCGGTTGCCGGAAAGTCTCGTTCCCGAACCTTCTGGAAGAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAACCATGACCGCTCTCGCCGAATTACTCTCCGGCGGCGCTCCGGCTGGTATCGACGGTGGCGCGTTGAGTTGA 594 0.6111 MESFEPNVDSSNSETLRESNQKKRRKIGDHAADHNSANAVPWRSDAEQRIYSRRLVEALRRTPSSAAKPRAAGQVREAADRVLAATARGRTRWSRAILRRWRKLRTPHKKAKKTSSTGLKRTRINGGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGIDGGALS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2081 197 MobiDBLite consensus disorder prediction 16 32 - -
Pvu7g2081 197 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 185 IPR036638 GO:0046983
Pvu7g2081 197 MobiDBLite consensus disorder prediction 1 15 - -
Pvu7g2081 197 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Pvu7g2081 197 PANTHER TRANSCRIPTION FACTOR BHLH150 15 196 - -
Pvu7g2081 197 MobiDBLite consensus disorder prediction 1 44 - -
Pvu7g2081 197 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 196 IPR044660 GO:0006355
Pvu7g2081 197 CDD bHLH_AtIBH1_like 125 180 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2081 Pvu-Chr7 44173412 44174370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2081 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.596 8.07e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2081 - - gmx:100783462 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2081 7 44173412 44174370 Pvu7g2081 7 44173412 44174370 ECH
Pvu1g2322 1 48622809 48623847 Pvu7g2081 7 44173412 44174370 ECH
Pvu1g2322 1 48622809 48623847 Pvu7g2081 7 44173412 44174370 PCT