Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2079 CTAGTTACTCGAGAGATCTTTCTTTCTATTACTCTCATTTTTATATCTTCTTTCTGGGTTTGTAGATCAATCGATTGTGGTGGCTCGCAAATTTCAAGAACCATCATAGTTGATAAATCACACAAATCACATTTCACATCATTGCAAGCTGCCATTGATTCAATATCACCAAACAACAATAAATGGGTCAAAATTCAGATAAATGCTGGCACTTACAAAGAGAAGGTTCAAATCCCAGAGAATAAGCCATGCATCTTTATACAAGGCCAAGGGAAAGATGTTACCACCATTGCATTTGATGACCACGTGGCACCAAATAGCAGTTCAACATTCACTTCCTTTTCAGACAACTTTGTTGCATCAGACATTACTTTTCAGTTAAACGGTAAATTTGTCGCTTTTTCTTTGCCAGATCCTGAGGTTCCAGCATTGGCCGCAAGAATATCTGGAGACAAAAGTGCATTTTTCAATTGTGGTTTCGTTGGTTTCCAAGATACTCTTTGGGATGAATTAGGTCGTCATTACTTCCAAGGTTGCACGATTGAAGGTGCAGTGGACTTCATATTTGGTGATGGACAATCCTACTACCGGGATTGTGTGTTGAATGTGACTGCCCTGGGTTCCATGACCGCACAAGCACGCATGTCAGACAGTGAGCCAACTGGTTTTGTGTTTGCAGGAGGTTCTGTGATTGGTAGCGGTACTGGTATCTCGTTATTGGGGAGAGGGTATCGTCCTTGTTCTAGAGTTATCTTCTTTAAAACAAACCTTGGAAGTGTGGTTCAGCCTGTAGGATGGGATGCTTGGTCCGCCAAAAACAACGTGAGTTGCCTTTTCTACTCTGAGATTATGTGTTCAGGACCAGGTTCTAATACTTTCCAACGTGTTCCTTGGAAAAAGAAATTGACTTTCACTCAATTTGCCAAAAAATATTCCTTGCAAGTCTTCGTCAACAAAGATGGATGGCTCTCCAATTTACCACACAAGACAGAATGA 996 0.4096 LVTREIFLSITLIFISSFWVCRSIDCGGSQISRTIIVDKSHKSHFTSLQAAIDSISPNNNKWVKIQINAGTYKEKVQIPENKPCIFIQGQGKDVTTIAFDDHVAPNSSSTFTSFSDNFVASDITFQLNGKFVAFSLPDPEVPALAARISGDKSAFFNCGFVGFQDTLWDELGRHYFQGCTIEGAVDFIFGDGQSYYRDCVLNVTALGSMTAQARMSDSEPTGFVFAGGSVIGSGTGISLLGRGYRPCSRVIFFKTNLGSVVQPVGWDAWSAKNNVSCLFYSEIMCSGPGSNTFQRVPWKKKLTFTQFAKKYSLQVFVNKDGWLSNLPHKTE* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2079 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 328 - -
Pvu7g2079 331 Gene3D - 28 330 IPR012334 -
Pvu7g2079 331 PANTHER PECTINESTERASE 5 328 - -
Pvu7g2079 331 SUPERFAMILY Pectin lyase-like 30 324 IPR011050 -
Pvu7g2079 331 Pfam Pectinesterase 35 319 IPR000070 GO:0030599|GO:0042545
Pvu7g2079 331 ProSitePatterns Pectinesterase signature 2. 181 190 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2079 Pvu-Chr7 44148625 44151719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2079 7 272 Carbohydrate Esterase AT2G19150 41.606 1.60e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2079 - - vun:114192590 404.06