Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2078 GATTGTGGTGGCTCGCAAATTTCAAGCACCATCACAGTTGATAAATCAAACAAATCATCAGATTTCACATCATTGCAAGCTGCCATTGATTCAATATCACCAAACAACACTAAATGGGTCAAAATTCAGATAAATGCTGGCACTTACAAAGAGAAGGTTAAAATCCCAGTGAATAAGCCATGCATCTTTATACAAGGCCGAGGGAAAGATGTTACCACCATTACATTTGATGACCACGTGGCACCAAATAGCAGTTCAACATTCACTTCCTTTTCAGACAACTTTGTTGCATCAGACATTACTTTTCAGAACTCGTACGGTTTGCAAATACTGGAAGATTTGCGAAATCATAAGATAAGCTTTGATGGGATAAGGGCTCCAACATTGGCCGCAAGAATATCTGGAGACAAAAGTGCATTTTTCAATTGTGGTTTCGTTGGTTTCCAAGATACTCTTTGGGATGAATTAGGTCGTCATTACTTTCAAGGTTGCATGATTGAAGGTGCAGTGGACTTCATATTTGGTGATGGACAATCCTACTACCGGGATTGTGTGTTGAATGTGACTGCCCTGGGTTCCATAACCGCACAAGCACGCAAGTTAGACAGTGAGCCAACTGGTTTTGTGTTTGCAGGAGGTTCTGTGATTGGTAGCGGTACTAGTAACTCGTTACTGGGGAGAGGGTATCGTCCTTGTTCTAGAGTTATCTTTTATAAAACAAACCTTGGAAGTGTGGTTCGACCTGCAGGATGGGATGCTTGGACCTCCAAAGACGACGTGTATGATCCATCTATTCATTCCTTTACCATTATATCATCACTCATATATACTTATATTATAGTGTTTATGCACTTATATTATAGTGTTTATGCAGGAGTTGCCTTTTCTACTCTGAGATTCTGTGTTCAGGACCAGGTTCTGGAACTTCCCAACATGTTCCTTGGGAAAAGAATTTGA 957 0.4054 DCGGSQISSTITVDKSNKSSDFTSLQAAIDSISPNNTKWVKIQINAGTYKEKVKIPVNKPCIFIQGRGKDVTTITFDDHVAPNSSSTFTSFSDNFVASDITFQNSYGLQILEDLRNHKISFDGIRAPTLAARISGDKSAFFNCGFVGFQDTLWDELGRHYFQGCMIEGAVDFIFGDGQSYYRDCVLNVTALGSITAQARKLDSEPTGFVFAGGSVIGSGTSNSLLGRGYRPCSRVIFYKTNLGSVVRPAGWDAWTSKDDVYDPSIHSFTIISSLIYTYIIVFMHLYYSVYAGVAFSTLRFCVQDQVLELPNMFLGKRI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2078 318 Pfam Pectinesterase 17 257 IPR000070 GO:0030599|GO:0042545
Pvu7g2078 318 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 257 - -
Pvu7g2078 318 ProSitePatterns Pectinesterase signature 2. 166 175 IPR033131 -
Pvu7g2078 318 PANTHER PECTINESTERASE 1 257 - -
Pvu7g2078 318 Gene3D - 3 269 IPR012334 -
Pvu7g2078 318 SUPERFAMILY Pectin lyase-like 6 258 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2078 Pvu-Chr7 44134994 44138543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2078 1 257 Carbohydrate Esterase AT2G19150 41.509 1.11e-62 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2078 7 44134994 44138543 Pvu7g2078 7 44134994 44138543 ECH