Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2075 ATGGATTTCCAGGGATTCCTAAACGACTTGCAGGATTGGGAACTTTCTAGAAAGGATAAAACACAAACACTGAAGTCACAAAAGGAAAATCAATTCACAAAAGCTTCATCTTCTCGACTTACTGGATCTGTGGGTGTGGAGAAGGCATCAAAAGCAGATGCTATTTCTTTTGATCGTGCAAGAAATTCTCAAGGACTGTACGATTTATCCAAAATTAATGATCCTTTAAATCGGTTGCATGGTAGTTTTGTTCCTGAAGATGTTCCCGATGCTGCTTCCGAGAAAGATCTGGGTAATGAGTTTTTCAAGCAGAAGAAATTTAAGGAAGCTAGAGACTGCTATTCAAGGAGCATTGCCTTATCACCAACAGCTGTAGCATATGCAAATAGGGCAATGGCCAATATCAAGCTCAGAAGATTCCAAGAGGCTGAGGATGACTGCACAGAGGCTTTAGATCTTGATGATCGTTACATAAAAGCATACTCACGAAGAGCAACAGCTAGAAAAGAACTTGGAAAAATTAAAGAATCAATGGAGGATGCTGAATTTGCTTTGAGGTTGGAACCGAACAATCAAGAAATCAAGAAACAGTATGCTGATGCTAAATCTTTGTATGAGAAAGATATTCTTCATAAAGCATCAGGAGCTCTGAGAAGAACTGTACAGGGGACTAATAAAGTGGGAAAGTCAGATGAAAAAGTTAATGGAGGTAGCATCCACCCCATTTCACATGGTGCTCAAAAGTCCGGTCCAGCTGAAGTTAATCATAAAAAGGTTAATGAGCAGCAAGTACCTATTAAAGAATCACTTGTAACAGAGGAGGTTGATAGCAGGGACACAATAACCAGAAAAAGGCCTCAAGCACAAGGAGGTGATGATTCTAAGAAAAGTTTGAGTGCAAGTAACAGTTTGGAGCAGAGAAATCACAGAATTATTAAGCCAGAATTTAAAGCATCTGTTCAACAGCTTGCTTCTCGTGCTGCTTCTAGAGCCATGGCTGAAGCTGCCAAAAACATAACACCACCAACCACTGCGTATGAATTTGAGGTCTCTTGGAGAGCATTGTCAGGTGATCTTGCTCTGCAGGCTCGTTTGTTAAAGGCTATATCTCCCCGTGAATTACCGAAAATATTCAAAAATGCCTTATCTTCTACCATACTTGTTGACATCATCAAGTGTCTTTCATCTTTTTTCACTGAGGACATGGATCTGGTTGTCAGTTATATGGAGCATTTGATCAAAGTTCCAAGATTTGACATGATTGTACTGTGCCTTTCATCAACAAATAAGGATGACATACGCAAGATCTGGGATGAAGTGTTCAGAAGTAAGGCAACACCAATTGAATATGCAGAGATTCTAGACAACCTCCGATCAAAGTTCTGCCTTGGACAGTGA 1398 0.4006 MDFQGFLNDLQDWELSRKDKTQTLKSQKENQFTKASSSRLTGSVGVEKASKADAISFDRARNSQGLYDLSKINDPLNRLHGSFVPEDVPDAASEKDLGNEFFKQKKFKEARDCYSRSIALSPTAVAYANRAMANIKLRRFQEAEDDCTEALDLDDRYIKAYSRRATARKELGKIKESMEDAEFALRLEPNNQEIKKQYADAKSLYEKDILHKASGALRRTVQGTNKVGKSDEKVNGGSIHPISHGAQKSGPAEVNHKKVNEQQVPIKESLVTEEVDSRDTITRKRPQAQGGDDSKKSLSASNSLEQRNHRIIKPEFKASVQQLASRAASRAMAEAAKNITPPTTAYEFEVSWRALSGDLALQARLLKAISPRELPKIFKNALSSTILVDIIKCLSSFFTEDMDLVVSYMEHLIKVPRFDMIVLCLSSTNKDDIRKIWDEVFRSKATPIEYAEILDNLRSKFCLGQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2075 465 MobiDBLite consensus disorder prediction 292 306 - -
Pvu7g2075 465 ProSiteProfiles TPR repeat profile. 158 191 IPR019734 GO:0005515
Pvu7g2075 465 ProSiteProfiles TPR repeat profile. 91 124 IPR019734 GO:0005515
Pvu7g2075 465 Pfam Tetratricopeptide repeat 126 154 IPR019734 GO:0005515
Pvu7g2075 465 Pfam Potential Monad-binding region of RPAP3 341 430 IPR025986 -
Pvu7g2075 465 MobiDBLite consensus disorder prediction 222 306 - -
Pvu7g2075 465 SMART tpr_5 125 157 IPR019734 GO:0005515
Pvu7g2075 465 SMART tpr_5 91 124 IPR019734 GO:0005515
Pvu7g2075 465 SMART tpr_5 158 191 IPR019734 GO:0005515
Pvu7g2075 465 SUPERFAMILY TPR-like 87 203 IPR011990 GO:0005515
Pvu7g2075 465 PANTHER OS05G0129900 PROTEIN 1 464 - -
Pvu7g2075 465 MobiDBLite consensus disorder prediction 271 291 - -
Pvu7g2075 465 Gene3D Tetratricopeptide repeat domain 84 189 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2075 52 195 Calmodulin-binding Proteins AT3G25230 26.250 8.83e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2075 K23002 - gmx:100784528 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2075 7 44096521 44101710 Pvu7g2075 7 44096521 44101710 ECH