Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2061 ATGGAGATTAACAGAAAACGTCTCAAGGGAGGCTTCCTTAGCTTCTTTGATTGGAATGGCAAGTATCAAAAGAAGCAGCTTTGTGACAGTCCTAAGTTGCCTGAAATTTCAAAGCAAGGAATGGAAAACATGGACAGCATGCCAAAATCAGAGGTCAATGAGATGAAAATGAACGGCAATGGAGCAAATCCTAGTAATAATGCAAGTTGTGGTTTTGATTGTGCCATATCAATTAGTAGTGATGAAGGGTGTCAGACCAAAGTCCCAGGGTTACTAGCCAGACTCATGGGTTTGGATTTATTGCCAGTTTCAACTGTCTCTGAGCTCTCTTCATCATCCACTTCCTTATATGGCTCCAACTCTCTAGGATCTTCCCATTCTGGTGATGCGGATGCTCTTCACTCAATGGTTGACTATTGTTGTCATGTGGATTCGCTAAACATGGGACTTAAGTCGGGCAAGTCTTCTTGGAGTGTTGTCATGGAATCAAAAGTGAGAAACCCGGCCATGAAGGGATTTCAGACTGAGATGTTGCCTCCAAGGTCTGCCAAAACCATTCCAGTTACTTATACCAAACTTTTGTCTCCTATTAATAGCCCTGGTTATATGCGACCTAAGCATGCAACTCAAATTATGGAGGCAGCTGCCAAAATAATTGAGGCAAGTTCCCAGCCATGTATGAGGAATAGAATGTCTTCAGCTGGACCTTCATCTGTACCCTTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTTCCCATTATGAATCCAAGTTCATAGGTAAGCACACTGCTAACCCTCTTAATGGAAAGCCTAGTGAGAGGAGAAACAGTTTATGTAAATCTACTTCGAAAGGCTTAAGAGATTCAGAAAAAAACAGTTCTTGCCGGTTGGCAAGCAAAGGAAAATCTGCTTCACTTGCAATTCCATCGAGAACCAATGTTCAGAGCTGTGATGAATTGACTTTGAATGGTAATAGGGGATGTGTGAAGCAGAAGGAACATAATGATATAAAATCAAACCAGTTGTCTCGGAGCCAGAAAAAACAAAGTGCAGACCGAGCCAGAGTCATTCAGCAGAAAGCTTGTACAGGCCAGAATAGTAATGTGCTTAGGAAGAATAACCAAAAGCTGAGTAGTGAAACCACCAAAGGCAACCCGACTTACAAGGCATACTCCCATAAGCCAACACAAAGTTGGTCTTTAGAAAGTTCTACTGGAGCAAAGAAGACCACAAAAAAGGGCGTTGTAAAAGCCAACACTGAGCCCAAAAGGTCAGGCACAAGGGTAACAGGTTCTCCAAAATCAGTTTCCAAAAGAAAGAGCATTTCCCAAAAGAAAAACTATATCAATAGGGAGGTTCACAATGAGGCAAGAGGCACTGATACTGCAGCTAATAATTATGAAAACAAGTCCATAAAATGCAATATTACAACTGATGGAAGTATTAACCAGGATGCATTTAGTATGAAAGGAAGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAAAAATGCCTGAGTTACAGTCCTCTATGGAGAAAACGATGGGAACAAGTAACAAAACTGATGTCAATTCTTGTAGCAATAACGATATGCTCTATCCCAAAAAATCATCATTATCCCCTCCCAGGTTACATGTAATAGATGGTGAGGCTTTAAGTGTCCTTTTGGAGAAAAAGCTGCAAGAATTAACATCTAGAATTAACCCAACTCAATGCTCCCTGAAGACAGAATGGTCCTCTGCTGGTTTGGGAGACAGAAGATTTCACCCCTACCTGACAACAGAATCAATCGAAGGGCCTAGCTGTAGCAGCAATAGTGAAAGCAGAAATGAAAGTTACTTGGATAGTGCGTATGGCAGCAGAGTTTATTCTTCCATGCAAGATGAAGAGGTATCTGGTTTTTCTCCAATGAATGAATCTCTGTCACTTGAAAACGAGGCCGAATGGTCGGACCAAAGCTCTTCCATAGTGATGGGGGATGACATGGTTGCCATTGAACAAATTCAGCCGAATTCAGTCGAATTTACTAGATCAGCTAGGAACGTGGAATTTGAATATGTTAAGGAAATACTCAACAACGCGGAGCTGATGACAGAAAAATTTGTAATGGGTGAGACAGATAAGATCATAATGCCAAATCTCTTTGATGTATTGGAGACTAAGAGCATTGTGGCAGAAAACTTTGGAAAGTACTCTAAGATTGAGAGGAAGGTTATATTTGACACCATGAGTGAGTGCTTAGAGTTAAGATGTAGACAAGTTTTTGTTGGAAGCTGCAAAACATGGCCTAAATGGGTGTCTTCAATTCAGAAGAAGAGCTTTTTAGCAGAAGAGTTGTACAAGGAAATGTTGAGCCTTAGGAGCACGGAAGAATTAGTGGTGGATGAACTTGTCTGCAAGGACATGAGCACCCAATGGGGTAGATGGCTTGAGTTTGACACTGAAGCATTTGAAGAGGGTTCAGAACTTGAGTTTGATGTTGTGACCTGTTTGATTAACGAATTGGTTTCTGATTTGCTGCACTTTTAA 2544 0.4096 MEINRKRLKGGFLSFFDWNGKYQKKQLCDSPKLPEISKQGMENMDSMPKSEVNEMKMNGNGANPSNNASCGFDCAISISSDEGCQTKVPGLLARLMGLDLLPVSTVSELSSSSTSLYGSNSLGSSHSGDADALHSMVDYCCHVDSLNMGLKSGKSSWSVVMESKVRNPAMKGFQTEMLPPRSAKTIPVTYTKLLSPINSPGYMRPKHATQIMEAAAKIIEASSQPCMRNRMSSAGPSSVPLRILDLKEKLEASHYESKFIGKHTANPLNGKPSERRNSLCKSTSKGLRDSEKNSSCRLASKGKSASLAIPSRTNVQSCDELTLNGNRGCVKQKEHNDIKSNQLSRSQKKQSADRARVIQQKACTGQNSNVLRKNNQKLSSETTKGNPTYKAYSHKPTQSWSLESSTGAKKTTKKGVVKANTEPKRSGTRVTGSPKSVSKRKSISQKKNYINREVHNEARGTDTAANNYENKSIKCNITTDGSINQDAFSMKGSNGVISFTFTSPLRRKMPELQSSMEKTMGTSNKTDVNSCSNNDMLYPKKSSLSPPRLHVIDGEALSVLLEKKLQELTSRINPTQCSLKTEWSSAGLGDRRFHPYLTTESIEGPSCSSNSESRNESYLDSAYGSRVYSSMQDEEVSGFSPMNESLSLENEAEWSDQSSSIVMGDDMVAIEQIQPNSVEFTRSARNVEFEYVKEILNNAELMTEKFVMGETDKIIMPNLFDVLETKSIVAENFGKYSKIERKVIFDTMSECLELRCRQVFVGSCKTWPKWVSSIQKKSFLAEELYKEMLSLRSTEELVVDELVCKDMSTQWGRWLEFDTEAFEEGSELEFDVVTCLINELVSDLLHF* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2061 847 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 588 - -
Pvu7g2061 847 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 613 845 - -
Pvu7g2061 847 MobiDBLite consensus disorder prediction 424 439 - -
Pvu7g2061 847 PANTHER DUF4378 DOMAIN PROTEIN 613 845 - -
Pvu7g2061 847 PANTHER DUF4378 DOMAIN PROTEIN 1 588 - -
Pvu7g2061 847 MobiDBLite consensus disorder prediction 281 296 - -
Pvu7g2061 847 MobiDBLite consensus disorder prediction 373 462 - -
Pvu7g2061 847 MobiDBLite consensus disorder prediction 332 355 - -
Pvu7g2061 847 Pfam DUF761-associated sequence motif 80 107 IPR032795 -
Pvu7g2061 847 MobiDBLite consensus disorder prediction 262 306 - -
Pvu7g2061 847 MobiDBLite consensus disorder prediction 373 411 - -
Pvu7g2061 847 Pfam Domain of unknown function (DUF4378) 688 839 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2061 Pvu-Chr7 43981728 43985722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2061 3 845 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.556 4.02e-83 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2061 - - vra:106771019 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2061 7 43981728 43985722 Pvu7g2061 7 43981728 43985722 ECH
Pvu1g2335 1 48751762 48756274 Pvu7g2061 7 43981728 43985722 ECH
Pvu1g2335 1 48751762 48756274 Pvu7g2061 7 43981728 43985722 PCT