Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2049 ATGAGTAGGACTGATTCATCTAATATGAAGCAGCCGCCTGTCCCACTGGCAACCCTGATTGGCCGGGAGCTACGAAATGGAAAAATTGAAAAGCCTTTTGTGAAGTTTGGCCAAGCTGGCTTGGCAAAGAAAGGAGAAGATTATTTTCTAATCAAGACGGATTACCAGAGAGTTCCTGGGGATTCGTCAACACTTTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATATCTGCTGCTATTTTTGCGAAGGAAAACATACTAAGTAATGTTTTAAGTGCAATACCGCAAGATATCAGTAGAGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGCTTTTGTGAAAACTGACATAGAGTTTCAGAAAAAAGGGGAAACTTCTGGAACAACAGCCACATTTGTTCTGATTGATGGATGGACTGTTACCGTCGCGTCCGTTGGGGATTCCCGTTGCATATTAGATACACAGGGAGGTGTTGTCTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGGATTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAACGTTTTTGGAGGCAATGAGGTGGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACAGATGTCGGAGAATTTATTGTGCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAAAGCTGGTGGAAGACTTATTATTGCTTCTGATGGCATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGGGGGCTGAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCGTCAGATCATCCTGTATTACCAACAATTCCAACAAAGAAGCATAATATGCTAACTTCCCTTTTATTTGGAAAGAAATCTAAAAACTCTACAAACAAAAGTACCAATAAGCTTTCTGCTGTAGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCTATGCTTACCGAGAGATTGGGTAAGGATTTTCCATCTAATACGAATTCTGGGACGTTTCGCTGTGCGGTTTGCCAAGCAGATCAACCCTCTGTAGATGGTTTATCAGTGAACACTGGGTCCTTTTTTTCTCCTCCAGTATCTAAGCCATGGGAAGGTCCGCTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTAGCATGCCCTCAGAAACAGTATAG 1290 0.438 MSRTDSSNMKQPPVPLATLIGRELRNGKIEKPFVKFGQAGLAKKGEDYFLIKTDYQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILSNVLSAIPQDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSKAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPTKKHNMLTSLLFGKKSKNSTNKSTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNTNSGTFRCAVCQADQPSVDGLSVNTGSFFSPPVSKPWEGPLLCTNCQKKKDAMEGKRSSMPSETV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2049 429 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Pvu7g2049 429 Gene3D - 35 301 IPR036457 -
Pvu7g2049 429 CDD PP2Cc 43 297 IPR001932 -
Pvu7g2049 429 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 426 - -
Pvu7g2049 429 SUPERFAMILY PP2C-like 39 297 IPR036457 -
Pvu7g2049 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Pvu7g2049 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 426 - -
Pvu7g2049 429 SMART PP2C_SIG_2 50 297 IPR001932 -
Pvu7g2049 429 SMART PP2C_4 23 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2049 Pvu-Chr7 43915287 43918670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2049 1 428 PP2C-type Phosphatase Gene Family AT1G09160 75.935 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2049 - - gmx:100794630 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2345 1 48825991 48829437 Pvu7g2049 7 43915287 43918670 PCT