Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2040 ATGAAGACCTGGACCACCTTCTACAACCTTTTTTTCCTCTTCATTCTCTTCCATTCTTCTTCTCTTCTAGCTTTCTCCTCCTTCTCCCATACCACATGCAACAATACACCCTACCCAGAATTCTGCAAAACCACTCTACCTCCTCAATATATATCCACACATGACCAATGCCGTTTCCTCCTTCAGCAATGCTTATCAACTACAAAATCGATTTCTGCATTGATCTCTTCTTATCTTACAAACCACTACGCCATTCCCGCTTCAACAGTACACGCCCTTGAAGATTGCTTCAACCTTTCTGAACTCAACATTGATTTCTTCTCCAATGTCCTCCAAGCCATTCAAAACACCGTCACTGGCTATCAGGTCTACGACTTGCAAACCTTGCTTAGTGCCACTTTAACCAACCAACAAACGTGCTTGAATGGTTTTAACGAGGTAACTCCCTATCCTGTAGTTACCAGTGCCTTATCAAGTCCCCTTTCTGATGCGATCAAACTATATAGCACATCTCTAGCCCTTTTCACCCGCGGTTGGGTTAGCGATGCCATGCAAGGATCAGCCACAGTTGAGACTATTACTAATAGAAAGTTACTGCAAACAAGCCTTGACAATGTGGAGGTGAGGCAAAAAGTGGTGGTGAACCCTGATGGGTCTGCTGATTTCACCACCATAAATGATGCAGTGGCTGCTGCACCCGAAAACAGCGGCACCAACAACGGGTACCATGTAATCTATGTTGTCGCGGGGATTTACAATGAGTACGTGTCTATTCCTAAGAACAAGCAGAACCTAATGTTGATTGGAGATGGCATCAACCGCACTGTGCTCACTGGCGATCGCAGCGTGGTCGATGGCTGGACCACTTTCCAATCTGCGACTTTTGCTGTTGTTGGAAAAGGGTTTGTTGCTGTGAACATAACATTTCGTAACACTGCTGGGTCCAGTAAGCATCAAGCTGTGGCTGTGAGAAACGGGGCGGACATGTCTACGTTCTACAATTGCAGTTTTGAGGGTTACCAAGACACACTGTACGTACATTCCCAAAGGCAATTCTACAAAAGCTGTGACATTTATGGCACAGTGGATTTTATATTTGGCAATGCAGCAACAGTATTCCAGGATTGTAACATTTATCCAAGACTTCCTATGCAAAACCAATTCAATGCAATCACAGCACAAGGTCGAACAGATCCAAACCAAAACACTGGCATCTCCATACAGAACTGTTGCATAACAGCAGCCAGTGAGTTGGGTGATGCTACTAGCAACTACAATGGAATACAGACATATTTGGGTAGGCCTTGGAAGGAGTATTCAAGGACTGTTTACGTACAATCTTTCATGGATGGCCTAATTGATCCAAAGGGGTGGAATGAATGGTCAGGGGATTTTGCTTTGAGCACACTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCAAACACGAACAATAGGGTCACATGGGAAGGGTACCATCTCATAGACGAAAAGGATGCACTTGATTTCACGGTGAAGAAGTTTATTCAAGGTGACAAATGGCTACCCACCACAGGAGTACCTTTCAAAGCAGGGTTACAGTAA 1587 0.4455 MKTWTTFYNLFFLFILFHSSSLLAFSSFSHTTCNNTPYPEFCKTTLPPQYISTHDQCRFLLQQCLSTTKSISALISSYLTNHYAIPASTVHALEDCFNLSELNIDFFSNVLQAIQNTVTGYQVYDLQTLLSATLTNQQTCLNGFNEVTPYPVVTSALSSPLSDAIKLYSTSLALFTRGWVSDAMQGSATVETITNRKLLQTSLDNVEVRQKVVVNPDGSADFTTINDAVAAAPENSGTNNGYHVIYVVAGIYNEYVSIPKNKQNLMLIGDGINRTVLTGDRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYNCSFEGYQDTLYVHSQRQFYKSCDIYGTVDFIFGNAATVFQDCNIYPRLPMQNQFNAITAQGRTDPNQNTGISIQNCCITAASELGDATSNYNGIQTYLGRPWKEYSRTVYVQSFMDGLIDPKGWNEWSGDFALSTLYYAEFANWGPGSNTNNRVTWEGYHLIDEKDALDFTVKKFIQGDKWLPTTGVPFKAGLQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2040 528 Gene3D - 205 527 IPR012334 -
Pvu7g2040 528 Pfam Pectinesterase 212 513 IPR000070 GO:0030599|GO:0042545
Pvu7g2040 528 SUPERFAMILY Pectin lyase-like 212 526 IPR011050 -
Pvu7g2040 528 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 13 526 - -
Pvu7g2040 528 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 174 IPR006501 GO:0004857
Pvu7g2040 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 177 IPR035513 -
Pvu7g2040 528 PANTHER PECTINESTERASE 13 526 - -
Pvu7g2040 528 SMART PMEI_2 24 174 IPR006501 GO:0004857
Pvu7g2040 528 CDD PMEI-like_3 31 179 - -
Pvu7g2040 528 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Pvu7g2040 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 177 IPR035513 -
Pvu7g2040 528 Pfam Plant invertase/pectin methylesterase inhibitor 28 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2040 Pvu-Chr7 43782137 43784099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2040 13 527 Carbohydrate Esterase AT4G02330 50.179 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2040 K01051 - gmx:100810329 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0923 6 20674550 20677332 Pvu7g2040 7 43782137 43784099 PCT