Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2039 ATGAGCGAGGAAGATGGAGGAAGCAAGAGGAGAATCGCCGTTATTGGTGTCTCTACCATCTTCCTTGTGGCTATGGTCGTTGCCATCGCATTTAGCGTCAACTACAACTCGGATTCCAACAATGACTCACAACAGAACAACCACGTAGTTTCCTCTGTTAAAGCGGTGAGAACCCTTTGTAAACCAACATATTACCAGAAAGAATGTGAGAAAAGCCTGAGAGAAGAGGCTGGGAACACCACAGACTCCAGAGAACTCATTAAAATTGTATTCAATATAACCATGAAGAAAATAGGTAAAGGACAACATAAAATAGATCACATGCTCGGGGCTGAGAGAAACCCCAGAGCCAGAATGGCACTTGCAACATGCAAGCAACTCATGAATCTTTCCGTTGGGGAATTCAAGAGGGCACTTGAGAAAATGGGCAAGTTTGATCTCGACAATCTCAACAACATCCTCACTAGTTTGAAAGTTTGGCTTAGCGGTGCAATAACGTACCAAGAGACTTGCTTGGATGGCTTCCATAACACCACCGTCCAAGCTGGGAATAGGATGAGGAACTTGTTGACCACTACCATGCACATGAGCAGCAACGCCCTTGCCATCATCACAGCACTTGCAAATACTGTCTCGGAATTGAGTGACGTCAATAAGCGTCAGCTTGTTGAGGATGACGAACATGTTTTTGGTCAAGATGAGGTTATTTCCTCGTTGATTTTTGATGATGATGATGATGGTGGTGGTGTTCGTAGACTCCTTTATCAAAATCCCTACAAACTCAAGGCCAATGCGATTGTGGCCAAAGATGGTAGTGAAAAGTTCAAGAGCATCGACCAGGCACTACAGAAAGTGCCTAAGAAGAACAAAAAGCCATTCGTGATTTACATTAGGGAGGGTGTTTATAATGAGTACATTGAAGTCACTAAAACAATGACTCGCGTGGTGTTTGTCGGTGATGGTGCCAATAAGACACGAATCACAGGCAACAGAAACTTCTTAGATGGGCTGAATACTTACAAAACCGCCTCAGTTGGGTTTGAGAATTCCGCTGGCCCCCACAAACATCAAGCAGTAGCCATAAGGGTCCAAGCAGACAGATCCATTTTCTATAGATGCTCAATGGATGGGTACGAGGACACCTTGTATGTTCATGCCATGCGCCAATTTTATCGGGATTGCACCATTTCAGGCACCACGGACTTTGTCTTTGGTGATGCAGTGGCTGTTTTTCAAAACTGCACTTTCGTGGTAAGAAAGCCATTGGAAAACCAACCATTGATTGTGACCGCTCAAGGTAGAAAGGAGAAGCACCAACCATCAGGAATAGTGATACAAGGAAGCTCCATTGTGTCGAATCATAGAATGAAGTTTGATAAGAAGGCTTACCTAGCTCGTCCATTGAAGAATTACTCGAGGACCATCTTCATGAACACTTACATGGAGGGCTTTATTGAACCTGATGGGTATGTGCCATGGAAAGGACCACAGGGTCTTTCAGGTATGAACACTTGTTTCTATGCTGAGTACAATAACAGTGGTCCTGGTTCAAACAAATCGAAGCGGGTAAAATGGCCAGGGATCAAGAAACTGAATTCAAAATCCGCAAGCGAATACTCACCATTAAATTTTTTTCATGGAGATGACTGGGTTAAAATTACTAGGATTCCATACTACTCTTCCACCCTCCCCAAGCACTAA 1701 0.4386 MSEEDGGSKRRIAVIGVSTIFLVAMVVAIAFSVNYNSDSNNDSQQNNHVVSSVKAVRTLCKPTYYQKECEKSLREEAGNTTDSRELIKIVFNITMKKIGKGQHKIDHMLGAERNPRARMALATCKQLMNLSVGEFKRALEKMGKFDLDNLNNILTSLKVWLSGAITYQETCLDGFHNTTVQAGNRMRNLLTTTMHMSSNALAIITALANTVSELSDVNKRQLVEDDEHVFGQDEVISSLIFDDDDDGGGVRRLLYQNPYKLKANAIVAKDGSEKFKSIDQALQKVPKKNKKPFVIYIREGVYNEYIEVTKTMTRVVFVGDGANKTRITGNRNFLDGLNTYKTASVGFENSAGPHKHQAVAIRVQADRSIFYRCSMDGYEDTLYVHAMRQFYRDCTISGTTDFVFGDAVAVFQNCTFVVRKPLENQPLIVTAQGRKEKHQPSGIVIQGSSIVSNHRMKFDKKAYLARPLKNYSRTIFMNTYMEGFIEPDGYVPWKGPQGLSGMNTCFYAEYNNSGPGSNKSKRVKWPGIKKLNSKSASEYSPLNFFHGDDWVKITRIPYYSSTLPKH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2039 566 Pfam Plant invertase/pectin methylesterase inhibitor 55 203 IPR006501 GO:0004857
Pvu7g2039 566 SUPERFAMILY Pectin lyase-like 262 559 IPR011050 -
Pvu7g2039 566 PANTHER PECTINESTERASE 10 563 - -
Pvu7g2039 566 Pfam Pectinesterase 264 548 IPR000070 GO:0030599|GO:0042545
Pvu7g2039 566 SMART PMEI_2 51 203 IPR006501 GO:0004857
Pvu7g2039 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 207 IPR035513 -
Pvu7g2039 566 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Pvu7g2039 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 209 IPR035513 -
Pvu7g2039 566 CDD PMEI-like_3 58 209 - -
Pvu7g2039 566 PANTHER PECTINESTERASE 10 563 - -
Pvu7g2039 566 Gene3D - 261 563 IPR012334 -
Pvu7g2039 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2039 Pvu-Chr7 43779010 43781510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2039 3 563 Carbohydrate Esterase AT3G05610 43.696 8.26e-176 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2039 K01051 - gmx:100810853 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0924 6 20680551 20682900 Pvu7g2039 7 43779010 43781510 PCT