Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2034 ATGAGTCGAGGTGTAAGTGCTCCGAAGGGCAAGAAGAAAGGGGTCACATTCACCATTGACTGCGCGAAGCCAGTGGAGGATAAGATCATGGACATTGCGTCACTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGCTGGCAAGGCCGGTGCTCTCGGTGACACCGTCGCCGTCGCACGCGAGAAGACCAAAATCATTGTTACATCGGACAGCAACTTCTCCAAACGGTACCTCAAGTACTTGACTAAGAAGTATTTGAAGAAGCACAATGTTCGTGACTGGCTCAGAGTGATTGCTTCTAACAAAGATAGAAACATTTATGAACTCAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGAATAG 372 0.4677 MSRGVSAPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVAGKAGALGDTVAVAREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEEE* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2034 123 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 123 - -
Pvu7g2034 123 PANTHER 60S RIBOSOMAL PROTEIN L22 1 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pvu7g2034 123 Gene3D - 5 123 IPR038526 -
Pvu7g2034 123 Pfam Ribosomal L22e protein family 13 121 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2034 Pvu-Chr7 43735363 43736512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2034 1 123 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.065 4.05e-63 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2034 K02891 - nnu:104598935 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2034 7 43735363 43736512 Pvu7g2034 7 43735363 43736512 ECH
Pvu6g0933 6 20779862 20781312 Pvu7g2034 7 43735363 43736512 ECH
Pvu7g2034 7 43735363 43736512 Pvu6g0933 6 20779862 20781312 ECH
Pvu7g2034 7 43735363 43736512 Pvu7g1511 7 36333601 36335016 ECH
Pvu6g0933 6 20779862 20781312 Pvu7g2034 7 43735363 43736512 PCT