Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2024 ATGGATTGGAACAATACATGTTCGGACCAAGTAATTGCGGAAATGATTGAAATGGGTTTCGAGTATTCCAGCATCGTGGAAGCCATAAAAGTAGTGGGTCCATCTATTCCCAGCGCTGTGGAACACATTCTCAATTCTACTACTGGAGAAGCATCCACAACCCACATCTCCAATTCGGATGCACGCAATGGAAATGCTCGAAAGAAACGACCTTTGCGCACATCCCGTTCAGTTCGACAGTCCAAGATATTCGACCATTTCCATTCCAATGATGATGTCAAAGAACACAAGGAGGATCTCCCTCAATTGGGAATTGATCCCAATCCCATTGTGCTTTCAGAGTCTTTTGAAGCGCCATATTTGGATGTTGAATCTGATTGGGAGCAGAAAATTAGCAATCTGATGAAAAAGCATTTTGGTTTTTCATCCTTGAAGAGTTTTCAGAAGGAAGCCATCTCTGCCTGGGTTGCTCATAAAGATTGTCTTGTCCTCGCTGCAACAGGATCTGGGAAATCTCTGTGCTTTCAGATTCCTGCATTGTTGTCTGGGAAAGTCGTGGTTGTGATTTCGCCCTTGATAAGCCTCATGCATGACCAGTGTTTAAAGCTAACTAGACATGGTATCAGTGCGTGCTTTCTTGGCTCTGGGCAACCAGATAATACCGTTGAACAGAAAGCGATGAGGGGATTGTATAGTATAGTGTATATCTGCCCAGAGACTGTTCTAAGATTGATTCAACCACTGCAGACGCTTGCAGAAAGTCGTGGTATTGCTTTATTTGCAATTGATGAGGTACACTGTGTTTCAAAATGGGGTCATGATTTTCGTCCAGATTACAGGCGACTGTCTGTACTGAGAGAAAATTTCAGTACTAGCAAGCTAAAATCCCTAAAATTTGATATACCTCTGATGGCCTTAACAGCTACAGCTACAAAAAGAGTTCGAGAAGACATTTTAAAATCATTGCACATGTCAAAAGAAACGAAAGTTTTTCTTACATCATTTTTTCGATCAAATTTACGCTTCACGGTAAAGCATAGTCGAGCATCACAGGCTTCTTATGCAAAAGATTTTCATGAATTGATTCATGTATATGGTAGTAAGAAAAATATTGATGAAAATGAAAAGGTTTTCATCTCAGATGATTCAGATCAGCTTTCTAATAGCTCCAATGCTAGTAGTAACTCTGATACAGACAGTGTTTCACCTGATGACATGGATGACAACCAAGATGATTATGCTTATAGAGATGTTAATATAATGCACGCAGGAAACACAGATGATTTTTTAACGGGAAAAGAATTGTCAATTGAGTTCCTGGAAAATGATATCGATACCTTTCAAAGTGTTGATAACTTAGATGTTACCCATGGTGACTTTTGTGTGCTACCTCACAAGGAATTGGAATTATCCGAGACAACTGACTCACCTAAGAAACCAGAAGGAAGAGTAAAAATTCTGAAAGAGCCTTTGGAACAAGGACCAACAATCATTTATGTACCCACCAGAAAAGCAACTCTGAGAATTGCGAAGTACCTATGCAAGTTTGGTGTGAAGGCAGCTGCTTATAATGCTGGGCTCACCAAATTGCATCTAAGAAAGGTTCATAAAGAGTTTCATGAAAATAATTTAGAGGTTATTGTTGCTACAATAGCTTTTGGAATGGGTATTGACAAATCAAATGTCAGAAGAATCATCCACTATGGTTGGCCACAGAGTTTAGAATCATACTACCAAGAAGCTGGACGGGCTGGTCGAGATGGGAAATTAGCAGATTGTATTCTGTATGCAAACCTAGCAAGCAAGCCATCACTCTTGCCTAGTCGAAAAAGTGAAGCTCAGAAAAAACAAGCATATATTATGTTATCTGATTGTTTCAGATATGGAATGAATACTTCCTGCTGTCGAGCAAAGATACTCGTTGAATACTTTGGAGAGGATTTCAGTCATCGGAAATGCCTCTTATGTGATGTGTGCACTGCCAGTCCACCTCAAAAGCAGAATCTAAAAGAGGAGGCCTGTATTTTGCTGCAAACCATAGGTGCCCATAATGGATGTAGGGATTCCAAGGATTGCTCATATGACGATGATATACATTTTGACTCCAATTACAGAGGACCAAGAGAGAGGCCAAATCTTAAGATGTTGGTTGGAACAATAAGGCAGCAGTTTCAAAAGTTTTCAACCATTGATGAACTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATATATCAGAGAAGGAGATGACAAGACCCATGTTCAGGCAAAATACCCGGAGCCAACAGAATTGGGATGGGAATTTGTGAAGTCCATGAATGAGGAAGCTTTCTATGTTTACCCTGAGGCAGATATGTTGCTTGCAAGAAACTTAATTAACAAACCATTTTCTTCATTCTCGGAATGGGGAAAGGGTTGGGCTGATCCTGAGATCCGTCGCCAGCGCCTAGAGAGAATGGGAGTGAATAGAAAGTCAGGGATGGTGTCAAGTTCCAAAAGGAAACGAAAGAGAAAAGGTAGAAAAGTGCAACATGATTTGAGGACTTCTCGTGGCAGACTAGGAGCAAAACTCTCAAAATATAAGTGA 2595 0.4042 MDWNNTCSDQVIAEMIEMGFEYSSIVEAIKVVGPSIPSAVEHILNSTTGEASTTHISNSDARNGNARKKRPLRTSRSVRQSKIFDHFHSNDDVKEHKEDLPQLGIDPNPIVLSESFEAPYLDVESDWEQKISNLMKKHFGFSSLKSFQKEAISAWVAHKDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISLMHDQCLKLTRHGISACFLGSGQPDNTVEQKAMRGLYSIVYICPETVLRLIQPLQTLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSTSKLKSLKFDIPLMALTATATKRVREDILKSLHMSKETKVFLTSFFRSNLRFTVKHSRASQASYAKDFHELIHVYGSKKNIDENEKVFISDDSDQLSNSSNASSNSDTDSVSPDDMDDNQDDYAYRDVNIMHAGNTDDFLTGKELSIEFLENDIDTFQSVDNLDVTHGDFCVLPHKELELSETTDSPKKPEGRVKILKEPLEQGPTIIYVPTRKATLRIAKYLCKFGVKAAAYNAGLTKLHLRKVHKEFHENNLEVIVATIAFGMGIDKSNVRRIIHYGWPQSLESYYQEAGRAGRDGKLADCILYANLASKPSLLPSRKSEAQKKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHRKCLLCDVCTASPPQKQNLKEEACILLQTIGAHNGCRDSKDCSYDDDIHFDSNYRGPRERPNLKMLVGTIRQQFQKFSTIDELWWRGLARILEVKGYIREGDDKTHVQAKYPEPTELGWEFVKSMNEEAFYVYPEADMLLARNLINKPFSSFSEWGKGWADPEIRRQRLERMGVNRKSGMVSSSKRKRKRKGRKVQHDLRTSRGRLGAKLSKYK* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2024 864 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 6 46 IPR015940 -
Pvu7g2024 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 599 IPR027417 -
Pvu7g2024 864 Gene3D - 112 336 IPR027417 -
Pvu7g2024 864 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE SIM 4 853 - -
Pvu7g2024 864 Gene3D - 600 782 IPR036388 -
Pvu7g2024 864 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 483 634 IPR001650 -
Pvu7g2024 864 MobiDBLite consensus disorder prediction 382 411 - -
Pvu7g2024 864 Pfam Helicase conserved C-terminal domain 484 587 IPR001650 -
Pvu7g2024 864 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 152 328 IPR014001 -
Pvu7g2024 864 SMART helicmild6 507 588 IPR001650 -
Pvu7g2024 864 Pfam DEAD/DEAH box helicase 147 314 IPR011545 GO:0003676|GO:0005524
Pvu7g2024 864 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Pvu7g2024 864 MobiDBLite consensus disorder prediction 47 75 - -
Pvu7g2024 864 PANTHER DNA HELICASE RECQ FAMILY MEMBER 4 853 - -
Pvu7g2024 864 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 134 363 IPR004589 GO:0004386|GO:0006310
Pvu7g2024 864 Gene3D - 466 597 IPR027417 -
Pvu7g2024 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 200 IPR027417 -
Pvu7g2024 864 Pfam RecQ zinc-binding 609 660 IPR032284 -
Pvu7g2024 864 MobiDBLite consensus disorder prediction 47 61 - -
Pvu7g2024 864 CDD DEXHc_RecQ 135 335 - -
Pvu7g2024 864 MobiDBLite consensus disorder prediction 382 400 - -
Pvu7g2024 864 SMART ultradead3 140 345 IPR014001 -
Pvu7g2024 864 MobiDBLite consensus disorder prediction 831 848 - -
Pvu7g2024 864 MobiDBLite consensus disorder prediction 821 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2024 Pvu-Chr7 43633482 43640320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2024 487 606 Eukaryotic Initiation Factors Gene Family AT5G11170 27.500 3.18e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2024 7 43633482 43640320 Pvu7g2024 7 43633482 43640320 ECH