Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2015 ATGGGGATTCCAGAAAATATTGTTGTTGGTTCTTATGTTTGGGTTGGAGATCCAGAAGTAGTTTGGACTGATGGCCAAGTACTGAATATCAATGGAGAAGAAGCTGAAATTCAAATTAGTAATGAGAAGAAGGTTGTTTCCCGTTTGTCAAAATTATATCCCAAGGATGTGGATGCGCCTGCTGATGGAGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGCATAATTTGAAAACTAGATACATGATGAATGAAATATATACTTATACCGGAAATATTCTCATTGCAATCAATCCCTTCCAAAGTCTTTCACATCTCTATGATACTAATGTGATGCAAAGATACAAGGGAGCAATGACTGGAGACTTGACCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGAAATGATTAATGAGGAGAAAAGCAACTCTATTCTTGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTTATGCAGTACCTGGCATTTTTGGGTGGTCACACTGCATCTGAAGGACGAACTGTTGAAAAACAAGTTCTAGAG 579 0.3955 MGIPENIVVGSYVWVGDPEVVWTDGQVLNINGEEAEIQISNEKKVVSRLSKLYPKDVDAPADGVDDMTKLAYLHEPGVLHNLKTRYMMNEIYTYTGNILIAINPFQSLSHLYDTNVMQRYKGAMTGDLTPHVFAIAEAAYREMINEEKSNSILVSGESGAGKTETTKMLMQYLAFLGGHTASEGRTVEKQVLE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2015 193 Pfam Myosin head (motor domain) 64 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 Pfam Myosin N-terminal SH3-like domain 10 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 PANTHER MYOSIN 6 193 - -
Pvu7g2015 193 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 193 - -
Pvu7g2015 193 SMART MYSc_2a 56 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 ProSiteProfiles Myosin motor domain profile. 62 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 Gene3D Kinesin motor domain 12 193 IPR036961 -
Pvu7g2015 193 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu7g2015 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 182 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2015 Pvu-Chr7 43451578 43454987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2015 1 193 Myosins gene family AT1G08730 73.057 1.34e-96 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2015 K10357 - pvu:PHAVU_007G1957000 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2015 7 43451578 43454987 Pvu7g2015 7 43451578 43454987 ECH