Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2008 ATGGCTTCTGCAACAACTGCAAATGACGCTGCTTCGGCTTCTTCCTTTGGATCTCCCTGCGGGGCATGCAAGTTCCTGCGAAGAAAATGTGCTGCTGACTGCATCTTTGCACCCTACTTTTGCTCCCAACAAGGACCTGCTAGATTCGCAGCCATTCATAAGGTTTTCGGGGCTAGCAACGTTTCCAAGTTGCTCTTGCGTATACCAGATAACGATCGTTTTGAGGCAATGGTCACAATCGCTTACGAAGCCCAAGCTCGCATCAGAGACCCTGTTTACGGTTGTGTCTCCCATATATTCGCCTTGCAGCAACAGGTAGCAAGCCTGCAGGCAGAGCTAGTGCAAATGAAGGCACAGCTGGATCAGAACCAGATGGTTTGTAGGAACTTGGAGAATCATTGGTCGGAGAATGTTGGACAACCATTGAATCCATTATGTCCCACTTCCATGAATAACCCTATTTCTCCTCAGAGCTCACTTGATTCAATTGATTACAGCAGCAGTATGAATGATGGAATGAGCATGCAAGATGTACAAAGCGGAGAGGATTTCTCATTCCAAGCTTGTTCTTGGAAAAGATCATATAACAATGACTTGGGTGAGCTGCAAGAATTGGCACTCAGGATGATGAGGAAGTGTGATTAG 645 0.4651 MASATTANDAASASSFGSPCGACKFLRRKCAADCIFAPYFCSQQGPARFAAIHKVFGASNVSKLLLRIPDNDRFEAMVTIAYEAQARIRDPVYGCVSHIFALQQQVASLQAELVQMKAQLDQNQMVCRNLENHWSENVGQPLNPLCPTSMNNPISPQSSLDSIDYSSSMNDGMSMQDVQSGEDFSFQACSWKRSYNNDLGELQELALRMMRKCD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2008 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 11 211 - -
Pvu7g2008 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 211 - -
Pvu7g2008 214 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
Pvu7g2008 214 Coils Coil 99 126 - -
Pvu7g2008 214 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2008 Pvu-Chr7 43360166 43361521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2008 1 211 AS2 family AT2G42430 50.201 2.09e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu7g2008 LOB 9.5e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1652 1 41835988 41837718 Pvu7g2008 7 43360166 43361521 PCT