Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2003 ATGGGTAGCAACTTGCACCGACTGCTCAGAAGCTTCTGTTTGGGTACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACACCGGGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCTAATATTTGTGACTCTTCTGAAAATAAGAGCTGCCAGAATACATGGGAGCGGATTGGCAGTGCAGATTTTTCGCATGATCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGAATTGTTGGACAGGTAGCTGTTACAGGAAAACATCGATGGATCTGTGTAGATAATCAAGTTACAAGCTCTGTCCCATCTTTTGAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTATAGCCGTAGTCCCCCTTGGAGTTGTTCAACTTGGTTCCTTAAATAAAGTTGCTGAAGATATGGGGGTTATAACATGTATCCGAAGTCTCTTTTTGTCTAATCAAGATTACACAATTTGCCATGCTCCTAATCAATTACAAAATAGTCTGAAGAATTCTTCGTCTGTGATGGATTCAGAAACTTCAGAAAGTGTGCCTGCTTACTTGCAGACTACAGAGAAAACCATGAAGCATGAATTACTGGATAACATAATGCCCTTTCAATGTCCTGGGAACAATGATTCACCTCATGCTGTATATGAGAAAACGACTGTTGATGTGGCCAAGCATGAGGGGCCTGAATTAAACAGTGATGGAAGTTCCATTTTGCTTCAGTCAATGTCTAATATGATGAATGTGGAGCAGCAGAAACTTTTAGGGATGAGACCTGTAAATGAGAGAAAGTTTGAAGGGAACAGTAGTGGCCGTGAAGATACAAGTGTGGAATCAGGAAAAAAATTGTCATCTTTTTTACACAATTTGGTTACAGATAATAATGGTGTCAATGATTTAGTATGTCCATCTGAAAATGCTGGAGTTAATTCTGTATCCTTCTCTTCAGACTTTCTTGATACAGTTGTTTGTGAGAGTGAAAAGTTTCATTATGTAGATATCAACCAAAAAGGAGTGAAGAACTGGTCCAGACCTTTAGATGCATACTCCCAAAAAGATACTGGGATGTCAAAGTTTCAGACTGAACCTTGTTCCAAGGATACCACATACACATTGAAGTTTCCTGCTGGCTATGAGTTACATGAAGCACTTGGGCCAAGTTTTCTAAAAGAGAGCAAATATTTTGATTGGGCTGTGAAGGCAAATCAAGATGTTAAAGCCACTGAGATATCAGATGAGATTAGCTGTAGCCAATTGACGTCTGAACCTCAGCGAGAGCATCTCTTGGAAGCTATGGTGGCTAACATAGGCCATAATAATAATGTCAATAGCAAGTTGTCAGTTTCGGCAACAATGCAGGCTGCAATAGCCTCAGGAGGTAATCCTGAGGGTTCCATCCACACTGTGCACACTATTAATTCTGAAAGCTGTTCCATAGATCAGCCTCATCTTGGTAGAGAGGAAAAACATTATAGTTTGAGTTCATCTGGGATATGTGGTATAATGTCCCCAAAGGGTTTTTCTTCTACATGTCCTAGTTCATGTAGTGAACAGTTTGAGAGATCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGTGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTTATCCAAGATCGTATTAAGGAGTTGAGGGAACTGGTACCCAATGGAGCAAAGTGCAGTATTGATTCGCTACTGGAGTGCACCATAAAACACATGCTCTTTCTCAAGAATGTAACTAAGCATGCTGACAAGCTAAATAAATTTGGGGACACAAAGACGAAGTTGCATCACATTCAAAAAGACATTAACGGATCATCAAGTTATCAACAAGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTTGTTCCATATTAGTGGAGAATCTTAATAAGAATGGCCAGATGCTAGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATCAGAAGCATGGGGCTGACAATACTGAATGGTGCAACAGAAGCTCATGGTGAGAAGACATGTATATGTTTTGTGGTTGAGGGAAGATCAGAAGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACAATGCATTCATAA 2226 0.4088 MGSNLHRLLRSFCLGTDWKYAIFWKLKHRARMILTWEDAYYDNPNICDSSENKSCQNTWERIGSADFSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHRWICVDNQVTSSVPSFEFADGWQSQFSAGIRTIVVIAVVPLGVVQLGSLNKVAEDMGVITCIRSLFLSNQDYTICHAPNQLQNSLKNSSSVMDSETSESVPAYLQTTEKTMKHELLDNIMPFQCPGNNDSPHAVYEKTTVDVAKHEGPELNSDGSSILLQSMSNMMNVEQQKLLGMRPVNERKFEGNSSGREDTSVESGKKLSSFLHNLVTDNNGVNDLVCPSENAGVNSVSFSSDFLDTVVCESEKFHYVDINQKGVKNWSRPLDAYSQKDTGMSKFQTEPCSKDTTYTLKFPAGYELHEALGPSFLKESKYFDWAVKANQDVKATEISDEISCSQLTSEPQREHLLEAMVANIGHNNNVNSKLSVSATMQAAIASGGNPEGSIHTVHTINSESCSIDQPHLGREEKHYSLSSSGICGIMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLKNVTKHADKLNKFGDTKTKLHHIQKDINGSSSYQQGSSWAMEVGGHLKVCSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSMGLTILNGATEAHGEKTCICFVVEGRSEGQNNRNLHRLDILWPLVQLLQSKSTMHS* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2003 741 MobiDBLite consensus disorder prediction 537 565 - -
Pvu7g2003 741 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Pvu7g2003 741 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 552 601 IPR011598 GO:0046983
Pvu7g2003 741 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 740 IPR043561 GO:0003700|GO:0006355
Pvu7g2003 741 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 740 - -
Pvu7g2003 741 MobiDBLite consensus disorder prediction 542 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2003 Pvu-Chr7 43284033 43290243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2003 1 737 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.935 1.51e-155 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2003 - - gmx:100777740 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2003 7 43284033 43290243 Pvu7g2003 7 43284033 43290243 ECH
Pvu1g1655 1 41914432 41922095 Pvu7g2003 7 43284033 43290243 PCT