Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2001 ATGGAGAAATTCTCGATGGCCGCGTCCCCTTCTCGCAAAGGCAGATCCAAGAAACCCAATGTCCCAAGCTCCAAGGTCCAATCGCCAAACCCTGTTGGCTTCGCCTCTCAGACGCCGGAGAAACCGCCGCAGCGGATCCGTAACCGCGGTGTCGCGCTCTCAATAGCTGACATAAGAAAAGTCGGCAAAGGGTTGCAGGAAATGAACCGACGCAGTGAAGCGACATCGTCACAGCAGAGCAAGAGTGTGAGGAGACAGATCTCACTGTGGCCTTCTTCTCCCAGTAAATCCAAGATTACTGAAGATGAATCCTCCAAACTTCCTGAAAAATATGAGATTTTGAATCAGTTCTTCGATCGTTTGGATACTTTGATTTCTATGTTCCGCCTGAAAGGGAAGACTCCATCCTTTACAGAGATCAGTTCTAGAATTGAATCTTTAACTGACAGGAGGTTTACTCTTGGGCATCTAGCCCAATTGAAATACATCTTACCTGAGGCTATTGTTCTTAAGAAGTTTCTTGTGCATGACGAACGGACTTGTTGTATGAAGCCCGACATTCACATTTCTTTAAACCCCGAGGCGGTAGAGGCGGTAGAGTCTGATACGAGAGTACAACGGAGGAGAGTGTCGTTAAAGAAGTTGTTTCAGGCGAGACTAAGGGATTTTTTGGAATCTCATCCCGATGGTGATGAAATTCCAGAAGGAACATTGCCTGAGCCATTCAATCGCCCGAAGAAAGATAATATTTTGGACATGTTGGAAACTCGTCTCCCAACAAAATTGTCAACCTGCATGCGCTACATTGACATTGTCAATAATACAGAGTCTGCTGATATAGATGAAAAATTGTTGACTAATGAAAATCTGACAGCACCTTCTCACATTGCTCCATCCTATAGAGCTCGATTCTCTTTGAAATGTAAACTAGATGGAGCAGATGATATACAACAAAATTCTGCATTAGATTCATTACAACCTTCCCCATCCGATTTGGCGTCGGAAGCAGCTAGTTCTGTAAATTCTCCAACAAGTTGCGCTTCTCTGGAATCATCCAGTGCTCCCCTTGCTACTCCAATCAAATCCATTGAGTACACAGAAAACGAAGATGGGGCTTTCACCAGCATTGGTGCCCTCTCAACTCCCACTAGAAAAACATTTGAGGACACAGGAAACAAATATGAGTCTCCCACCATAGATGCGTTCTCTACTCCAGCCAGAAAAGTCATTGAATACACAGTAAACAAAGATGGTTCTCCCAAAATCATTGATGCCATGTCAACACCAACCAAACTTATTTCTACTCCAAGGTTGATGAGTGCCACACCTGCATTGTCTTCACCCAAAAGACATTATATGAGCCCAGATGACCACCCTATCAGTTCTTTGAACAAGTTAGCTAGGCGACCACCTCGGTCAAGGTCATTGAAATTCGACACCCCAGTGAAGAACAAGGAGGCTGTGAATGAAGGCAATGCTGGTGCCTTACCAATAGATGATGACGTTTTTGACATCCTCCCTGGAAAACTTATCCAATCGATTAGAGAAAAGGAAAGAATAGCGATGGAGGAAAGAGACCCAGATATTACTCGAGCAAAGAAAAGGAAAAAAATAATAGCTAACCTCCCTAGGCTCTTTGATATGATTCGCCTATTGCTTCGACAGCGTAACTGTATCACTAAAGATGAGCTTGTAATGAAGATAATTTCAAGCCACAGCGATATTGTGGACAGAAGTGAAGTGGAAGAGCAGCTAAGCTTGCTGCAAGAATTAGCACCCGATTGGATTTCTGAGAAACAGGTCTCTAGTGGAGATTTTCTATTCTTCATAAACAAAATGTTGAGCGCTGAAACTATTCGGGCATCTCTTGAAGAAGCAACATAG 1884 0.4368 MEKFSMAASPSRKGRSKKPNVPSSKVQSPNPVGFASQTPEKPPQRIRNRGVALSIADIRKVGKGLQEMNRRSEATSSQQSKSVRRQISLWPSSPSKSKITEDESSKLPEKYEILNQFFDRLDTLISMFRLKGKTPSFTEISSRIESLTDRRFTLGHLAQLKYILPEAIVLKKFLVHDERTCCMKPDIHISLNPEAVEAVESDTRVQRRRVSLKKLFQARLRDFLESHPDGDEIPEGTLPEPFNRPKKDNILDMLETRLPTKLSTCMRYIDIVNNTESADIDEKLLTNENLTAPSHIAPSYRARFSLKCKLDGADDIQQNSALDSLQPSPSDLASEAASSVNSPTSCASLESSSAPLATPIKSIEYTENEDGAFTSIGALSTPTRKTFEDTGNKYESPTIDAFSTPARKVIEYTVNKDGSPKIIDAMSTPTKLISTPRLMSATPALSSPKRHYMSPDDHPISSLNKLARRPPRSRSLKFDTPVKNKEAVNEGNAGALPIDDDVFDILPGKLIQSIREKERIAMEERDPDITRAKKRKKIIANLPRLFDMIRLLLRQRNCITKDELVMKIISSHSDIVDRSEVEEQLSLLQELAPDWISEKQVSSGDFLFFINKMLSAETIRASLEEAT* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2001 627 MobiDBLite consensus disorder prediction 69 98 - -
Pvu7g2001 627 Pfam DNA replication factor CDT1 like 107 220 IPR014939 -
Pvu7g2001 627 MobiDBLite consensus disorder prediction 1 52 - -
Pvu7g2001 627 CDD Cdt1_m 91 261 IPR014939 -
Pvu7g2001 627 PANTHER DNA REPLICATION FACTOR CDT1 17 627 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pvu7g2001 627 Pfam DNA replication factor Cdt1 C-terminal domain 510 601 IPR032054 -
Pvu7g2001 627 SUPERFAMILY "Winged helix" DNA-binding domain 103 242 IPR036390 -
Pvu7g2001 627 SMART CDT1_2 107 240 IPR014939 -
Pvu7g2001 627 MobiDBLite consensus disorder prediction 16 43 - -
Pvu7g2001 627 CDD Cdt1_c 505 624 IPR032054 -
Pvu7g2001 627 MobiDBLite consensus disorder prediction 226 246 - -
Pvu7g2001 627 MobiDBLite consensus disorder prediction 445 477 - -
Pvu7g2001 627 MobiDBLite consensus disorder prediction 64 104 - -
Pvu7g2001 627 Gene3D - 500 627 IPR038090 -
Pvu7g2001 627 MobiDBLite consensus disorder prediction 320 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2001 Pvu-Chr7 43265255 43268528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2001 418 625 Core DNA Replication Machinery Family AT2G31270 45.374 4.82e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2001 K10727 - gmx:100778818 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2001 7 43265255 43268528 Pvu7g2001 7 43265255 43268528 ECH