Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1996 ATGGAAGAGGACTCCTCTAAGGACAAAAACTTGCACACCAAGAAAGAGCCACACTATAGAGGAGTCCGGCAGCGGCCGTGGGGGAAGTTCGCCGCCGAAATTCGGGACCCCACCAAGCATGGTGGCCGAGTGTGGCTGGGCACATTCCTCACGGCGGAGGAGGCTGCCAGAGCTTATGACCGTGCTGCCTTTGAGATGAGAGGTGCTTCAGCCGTTCTCAATTTTCCAAATGAGTATCCTTCATGCTCTTCTATGAGCTCCTCTTCGTCATTAACACCTTCTTCTTCTTCTTCAATGCTTAAACATGATCATGGTAAACAAGTTATTGAGTTTGAGTGCTTGGATGACAAATTGTTAGAGGACCTTCTTGATTTTGATGACTATGCCTACGAGAAAGACTTGCCTAAGAAGTGA 414 0.4831 MEEDSSKDKNLHTKKEPHYRGVRQRPWGKFAAEIRDPTKHGGRVWLGTFLTAEEAARAYDRAAFEMRGASAVLNFPNEYPSCSSMSSSSSLTPSSSSSMLKHDHGKQVIEFECLDDKLLEDLLDFDDYAYEKDLPKK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1996 137 MobiDBLite consensus disorder prediction 1 24 - -
Pvu7g1996 137 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Pvu7g1996 137 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Pvu7g1996 137 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Pvu7g1996 137 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Pvu7g1996 137 PIRSF PTI6 2 133 IPR017392 GO:0003700
Pvu7g1996 137 MobiDBLite consensus disorder prediction 81 100 - -
Pvu7g1996 137 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Pvu7g1996 137 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Pvu7g1996 137 PANTHER ETHYLENE RESPONSE FACTOR 3 127 - -
Pvu7g1996 137 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Pvu7g1996 137 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Pvu7g1996 137 PANTHER DNA-BINDING DOMAIN 3 127 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1996 Pvu-Chr7 43237645 43238058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1996 15 124 AP2-EREBP Transcription Factor Family AT3G23230 56.667 6.48e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu7g1996 AP2 3.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1996 - - gmx:100810414 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1996 7 43237645 43238058 Pvu7g1996 7 43237645 43238058 ECH
Pvu7g1996 7 43237645 43238058 Pvu1g1660 1 41963965 41964626 PCT